KEGG   Loxodonta africana (African savanna elephant): 100664518
Entry
100664518         CDS       T04351                                 
Symbol
DDX41
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lav00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100664518 (DDX41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lav03041]
    100664518 (DDX41)
Enzymes [BR:lav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100664518 (DDX41)
Spliceosome [BR:lav03041]
 Complex C
  Other components
   Complex C specific factors
    100664518 (DDX41)
SSDB
Motif
Pfam: DEAD Helicase_C zf-CCHC ResIII UTP25 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 100664518
NCBI-ProteinID: XP_003404952
Position
Unknown
AA seq 613 aa
MEESEPERKRARTDEATAGGGRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMXKGITYDDPIKTSWMPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKD
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggaggagtcagaaccagagcgcaagcgggctcgcaccgacgaggcgactgccggagga
ggtcgctccgaggcggaggatgaggacgatgaggactacgtgccgtacgtgccgctgcgg
cagcgccggcaactgctgctccagaagctgctacagcgaaggcgcaagggggctgcagag
gaggagcagcaggacagcggcagtgagccccggggagatgaggacgacatcccgctgggc
cctcagtccaacgtcagtctcctggaccagcatcagcacctaaaagagaaggctgaagcc
cgcaaagagtccgccaaggagaagcagctgaaagaagaagagaaaattctggagagtgtg
gccgagggccgagccttgatgtcagtgaaggagatgngcaagggaatcacgtatgatgat
ccaatcaaaaccagttggatgcccccccgttacgtcctgagcatgtctgaagagcggcac
gagcgtgtgcgaaaaaagtaccacatcctggtggagggagatggtatcccaccacccatc
aagagcttcaaggagatgaaattccctgcagctatcctgagaggtctgaaaaagaaaggc
atccaccacccgacgcccattcagatccagggcatccccaccattctatctggccgggac
atgatcggtatcgccttcaccggttccggcaagactctggtgttcacgctgcccgtcatc
atgttctgcctggaacaagagaagaggttacctttctccaagcgagagggaccatatgga
ctcatcatctgcccttcgcgggagctggcccggcagacgcacggcatcctggagtactac
tgccgcctgctgcaggaagacagctcgcccctgctgcgctgcgcactctgcattgggggc
atgtctgtcaaagagcaaatggagaccatccgacatggggtgcacatgatggtggccacc
cctgggcgcctcatggatttgctacagaagaagatggtcagtctagatatctgtcgctac
ctggccctggacgaggctgaccgcatgattgacatgggctttgagggtgacatccggacc
atcttctcctacttcaagggccagcggcaaaccctgctcttcagtgctaccatgcccaag
aagattcagaattttgccaagagcgccctggtgaagcctgtcacaatcaacgtgggccgt
gccggggctgccagtctggacgtcatccaggaggtggaatatgtgaaggaagaggccaag
atggtgtacctgctcgagtgcctgcagaagacacccccaccagtgctcatcttcgcagag
aagaaggcagacgtggatgccatccatgagtacctgctgctcaagggggtcgaggctgtg
gccatccatgggggcaaagaccaggaggaacggaccaaggcaattgaggcattccgagag
ggcaagaaggatgtcctcgtggccacagacgtagcctccaagggcctggacttccctgcc
atccagcacgtcatcaattacgacatgcctgaggagattgagaactatgtacaccgtatc
ggccgcactgggcgctcaggaaacacgggcattgctaccaccttcatcaacaaggcctgc
gatgagtctgtgctgatggacctcaaagccctgctgctggaagccaagcagaaggtgccc
cctgtgctgcaagtgctacactgcggggacgagtccatgctggacatcggaggagagcgt
ggctgtgccttctgcgggggtctgggccatcgcatcacggattgccccaagctggaggct
atgcagaccaagcaggtcagcaacatcggccgcaaggac

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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