KEGG   Loxodonta africana (African savanna elephant): 100667893
Entry
100667893         CDS       T04351                                 
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04151  PI3K-Akt signaling pathway
lav04510  Focal adhesion
lav04512  ECM-receptor interaction
lav04820  Cytoskeleton in muscle cells
lav04926  Relaxin signaling pathway
lav04933  AGE-RAGE signaling pathway in diabetic complications
lav04974  Protein digestion and absorption
lav05146  Amoebiasis
lav05165  Human papillomavirus infection
lav05200  Pathways in cancer
lav05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100667893
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100667893
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100667893
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100667893
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100667893
  09154 Digestive system
   04974 Protein digestion and absorption
    100667893
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100667893
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100667893
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100667893
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100667893
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100667893
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lav04147]
    100667893
   00536 Glycosaminoglycan binding proteins [BR:lav00536]
    100667893
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   100667893
Glycosaminoglycan binding proteins [BR:lav00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100667893
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 100667893
NCBI-ProteinID: XP_010593035
Position
Unknown
AA seq 1686 aa
MASATPSCPHPPTEQSPPPQQLGRPGPIGIQGPTGPQGFAGPIGLSGLKGERGSPGSLGP
YGPKGDKGSMGVPGFLGINGIPGHPGHPGPRGPPGLDGCNGTEGAAGFPGHDGYPGLLGP
PGIPGQKGTKGDPVIAHGTLKGMKGDPGLPGLDGSAGPEGAPGSPGVTGPTGYLGLQGPP
GPPGLPGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPQ
GFPGVVGPPGIPVIGTTASTGEKGEKGISGLPGPRGPIGSEGVQGPPGSQGKKGSSGLPG
FSGFPGIKGNKGGIGLPGPDVFIDTEGAVISGYPGDPGVPGSRVLKETKAFQGLPGPSGT
PGLPPISPGAPGSLGSQGVPGLKGDRGDPGHTTVGATGLPGRIGLPGLPGPPGPPGPPGP
SFETEPLKNAEAGYPGLRGERGPKGNPGLKGVKGDSGFCACDGGVPNTGPPGEPGLPGPP
GLMGLPGRKGIRGDTGSEGAEGPAGSPGLFGPPGPAGPKGEKGEPTQSTRPGMPGEQGDD
GPQGHPGETGVPGKDGVPGLPGLPGPLGDAGQGFPGEKGFAGLPGRKGQHGLTGLPGIGL
PGSPGPRGLPGDKGIDGLPGQQGLPGPPGDCCCREKVGKGVIDTEGGITLPCIITGLYGP
SGLPGAPGVPGPKGIRGYPGTPGQPGVRGAKGEPGSAGLVRLPELPGFPGPRGEKGLPGF
PGLPGKDGLPGNVGSPGLPGPKGAPGDIFGAENGAPGEQGLQGLPGDRGFPGDSGFPGPK
GLLGKSGMLGAKGERGSPGAPGHTGKPGPRGPGGLSGIKGKPGLPGTVGFPGLAGRPGKK
GSRGEAGHPGSTGKRGLPGLKGLPGSAGLIGFLGSSGLPGATGLPGLPGPKGEKGSVGLI
GFPGIPGLPGIPGASGLKGIPGSPGRIGTSGPAGSPGEKGDRGNPGPVGIPGPRLPMLNL
WFKGDKGSRGSAGSDGFPGPRGDKGEAGRPGPTGLPGVPGLASSIKGLVGRPGPSGSLGL
RGLPGLKGAPGITGFPGMPGETGIRGLNGAPGLPGVAGLPGSKGDPGQSLEIPGTPGPKG
QPGERGFKGIKGKDGPIGDVGFPGNKGEDGKDGVPGDIGLPGSPGFPGIAGLRGDPGLPG
SPGHAGVTGPLGHPGLVGPKGFPGLSGLHGLNGLPGTKGAHGTPGPSITGVPGPAGLPGP
KGEKGSPGIGIGAPGKPGVRGQKGGRGFPGVQGPAGLPGAPGISLPSVIAGQPGDPGRPG
LDGERGRPGSPGPRGPPGPSSDQGDSGNPGFPGIPGPQGPKGDQGIPGFSGPPGELGLKG
MRGEPGVMGTPGKVGPPGDPGLPGMKGKAGPGGFSGPRGVPGQTPIAEAIQVPPGPLGLP
GIDGIPGLVGDPGVQGPVGRQGSKGLPGISGKDGRSGLPGPPGVLGDPGVPGLQGPPGFE
GAPGKQGPFGRPGMPGQTVNVGYTLVKHSQSEQVPLCPVGMSQLWVGYSLLFVEGQEKAH
NQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQIPRYI
SRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCL
EDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGEEPVSETLKAGQLHTRVSRCQ
VCMKSL
NT seq 5061 nt   +upstreamnt  +downstreamnt
atggcctcagcaaccccctcctgccctcatcctcccaccgagcagtcccctcctccccaa
cagctggggcgacctggaccgattggaattcaaggtccaacaggccctcaaggatttgct
ggccctattggtttatcagggttgaaaggagaaaggggctccccgggctctctgggacca
tatggacccaaaggagacaagggttccatgggagttcctggctttcttggcatcaatggg
attccgggccaccctggacatccagggcccagaggcccacctggtctggatggctgtaat
ggaactgaaggagctgctggatttccaggccatgatggataccctgggcttctcggacca
cctggtatccctggtcagaaagggactaaaggtgatccggttattgcccacggtactctt
aaaggaatgaagggggatcctgggctgcctggactggatggaagtgctggtccagaagga
gcacccggctctccaggagttacaggacccacaggatacctaggccttcaaggtcctcca
ggtcccccgggtctccctggtcctgatgggaatatggggttaggtttccaaggagagaaa
ggagtcaagggtgatgtgggcctccccggacctgcgggaccaccaccatctacgggagag
ctggaatttatgggatttccaaaagggaaaaaaggatccaaaggtgaaccagggccccag
ggtttcccaggtgtagttggtcctccaggcatcccggtaataggaaccacagcctctacc
ggagaaaaaggagaaaagggaatctctggtttgccaggacctaggggtcccataggttca
gaaggagtccaaggccctccaggaagtcagggcaagaaggggtcctctggtttacctggg
ttcagtggattcccgggaattaagggtaacaaaggtggcattggactgccaggtccagat
gttttcattgatacagaaggagctgtaatctcaggttatcctggagaccctggtgtacca
ggctcccgggtcttaaaggagacgaaggctttccagggcctacctggcccttctggcacc
cctggcctcccaccaatctcaccaggtgccccaggctccctgggctctcagggtgttcca
ggcctgaagggggaccgaggagacccaggccataccacagttggggcaactggtctccca
ggcagaattgggttaccaggcctaccaggcccaccaggcccaccaggcccacctggtcca
tcatttgagactgagcccctaaagaatgctgaggcagggtaccctggcctcagaggagaa
agaggcccgaaaggaaacccaggcctcaaaggagtaaaaggggactccggtttttgtgct
tgtgatggtggcgtccccaacactggaccacctggggaaccaggcctgcctgggccacca
ggtctcatgggtcttccaggccgcaaaggaatccgaggagatacaggctctgagggtgca
gagggcccagctgggtctccaggtttatttgggcctccaggtcctgcaggccccaaagga
gagaagggagaaccaactcaaagtacaagaccagggatgccaggagagcagggtgatgat
ggtccccaggggcaccctggtgagacaggagtcccaggcaaggacggagtaccaggttta
ccaggtctgccaggccctctgggtgatgccggacagggctttcctggagaaaaagggttc
gcaggacttcctggtagaaaaggccagcatggtctaactggcctcccaggaattgggctg
ccaggatctcctggacctcgtgggcttccaggagacaaaggaatagatggattaccagga
caacaaggtcttcctgggcctccaggtgactgctgctgcagggagaaggttggtaaagga
gtcatagacacagagggaggaatcacgttgccatgtattattactggcttatacggtcca
tcaggcctcccaggagctcccggagtcccaggccctaaaggaatccgtggctaccctggg
actccaggccagcctggagtacgtggagctaaaggagagcctggaagtgctggattagtt
cgtctccctgaattgccaggatttcctggacctcgtggggagaagggcttgcctgggttt
cctgggctccctggaaaagatggcttgcctgggaacgttggcagtccaggtttaccaggt
cccaagggagcccctggtgacatctttggtgctgaaaatggtgctccaggagagcaaggc
ctccaaggattgccaggggacagaggatttcctggagactctggctttccaggacccaag
ggtttgcttgggaagtctggcatgctgggcgccaaaggtgagcggggcagccctggagca
ccgggacacacgggaaagccaggcccccgagggccaggtggcctgtctggcatcaaggga
aaacctggtctcccgggaacagtgggctttccaggcttggcaggacgtcctggaaagaaa
ggctcgagaggtgaggcaggtcacccaggatcaactggaaagagaggtctgcctgggctc
aaaggccttcctggatctgcaggcctaataggcttcctggggagctcaggcttgccaggg
gccacagggttgccaggtctcccaggcccaaagggtgagaaggggtccgttggactgata
ggttttccagggataccaggtctccctggtattcctggtgcaagtggattaaagggaatt
cctgggtcaccaggaagaatcggaacatctggacctgctggtagccctggtgaaaaagga
gacagaggcaacccagggccagtcggaatacctggcccaagactcccaatgctgaatctt
tggttcaaaggagacaaaggctcccggggctcagctggatcagacggatttccagggccc
agaggtgacaaaggagaggctggccgccctgggccaacaggcctccctggagttcctggg
cttgccagctctatcaaaggacttgttggaaggccaggcccctctggctccttgggacta
cggggcttgcctggcctgaagggagcccctgggatcacaggcttcccaggaatgcctgga
gaaactggtatacggggtcttaatggagctccagggctcccaggagtagctggtctccca
ggttctaaaggagatccaggccagtcacttgaaattcctggtaccccaggacccaaggga
caacctggggagcgtggttttaaaggtatcaaaggaaaagatggcccaattggtgatgtg
ggtttcccaggaaataaaggtgaagatggaaaagatggagttcctggagacattggcctt
cctggctctccaggattccctgggattgcaggactgagaggagacccagggcttccaggt
tctcctggtcatgcaggggtaactggaccgctgggacaccctggcctagtaggacctaaa
ggcttccctggactttctggcttacatggattaaatgggcttccaggaactaagggtgcc
cacggcactccaggacccagtataaccggtgtgcctgggcctgctggcctgcctggcccc
aaaggggaaaaaggctctccaggaattggcattggagccccagggaaaccaggtgtgaga
ggacaaaaaggtggccgaggttttccaggtgtccaaggccctgctggtctccctggtgcc
ccaggcatctccttgccctcagtcatagcaggacagcctggtgaccccgggcgaccaggc
ctagatggagaacgaggccgcccaggctctcctgggccccggggtccccctgggccatcc
tcggatcaaggcgactctggaaaccctggcttccctggaattcctggccctcaagggccc
aagggagaccaaggaatcccaggtttctctggtccccctggagagctaggactgaaaggc
atgagaggtgagcctggcgtcatggggactccaggcaaggttgggccacctggagaccca
ggacttcccgggatgaaggggaaggcagggccaggaggcttttctggcccccgaggtgtt
cctgggcaaacaccaatcgcagaagccatccaggttccccctggacctttgggtctacca
ggcatcgatggcatccctggccttgtgggggaccctggggttcaaggtcctgtaggccga
caaggttccaaaggtttacctggcatctctggcaaagatggccgcagtgggctcccaggc
ccacctggggttcttggtgatcctggtgtccctggactgcaaggccctccaggatttgaa
ggagctccagggaagcagggcccctttgggaggcctggaatgcctggccagaccgtgaac
gtgggctacaccttggtgaagcacagccagtcggagcaggtgcccctgtgccctgtcggg
atgagccagctgtgggtgggttacagcttgctgttcgtggaggggcaggagaaagcccac
aaccaggacctggggtttgctggttcctgcctgccccgcttcagcaccatgcccttcatc
tactgcaacatcaatgaagtgtgccactatgccaggcgcaatgataaatcttattggctc
tccaccactgcccctatccctatgatgcccgtcggccagacccagattccccggtacatc
agccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagccaggatatc
accatcccacagtgccccctgggctggcgcagcctctggatcggatactccttcctcatg
cacactgctgctggggccgagggtggaggccagtccctggtctcacctggctcctgccta
gaggactttcgggccactcctttcatcgagtgcagtggtgcccggggcacttgtcactac
tttgccaacaaatacagcttctggctgacgacagtggaggagaggcagcagtttggggag
gaacctgtgtctgaaacactgaaagccggacagctccatactcgggtcagccgctgccag
gtgtgtatgaaaagtctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (61)   

Download RDF
DBGET integrated database retrieval system