KEGG   Lates calcarifer (barramundi perch): 108873054
Entry
108873054         CDS       T04895                                 
Symbol
als2b
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108873054 (als2b)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    108873054 (als2b)
SSDB
Motif
Pfam: RCC1 MORN RCC1_2 VPS9 PH RhoGEF
Other DBs
NCBI-GeneID: 108873054
NCBI-ProteinID: XP_018516602
Position
LG7_2:complement(2634593..2652502)
AA seq 1704 aa
METQRKSSGDDGGGERGLLHTWKGYSCSVTPERLLLPRPVLQVALGARHGVLLVEGGQVY
SFGELPWKQSQVPEPAKPTLESALSGQRVVAVAAGSFHSGAVTEDGGIHMWGDNGAGQCG
LSGLSTVPNPTPVALVDSDTSPPQTLPVLELACGEKHTLALSVQREVWAWGSGCQLGLNA
SVFPVWKPQKVEHLVGRCVLQVACGASHSLALVRCLGPQDIHRPPVDKCRQCNQLLYTMT
DKEDHVIISDSHYCPLGVELTEDEGMLEAPAPTPGLKTSPSEPVLPSHTSTTNSDSPAAP
SKSADPSSGPSPTQDSEKGESALANGVLPSSDSDPAAQTKDGSGAVSVVKSSLYPDEQAV
KDYLKKLSDNTQTDAKMTAGGLHSLLPSAGGLTSTPSSTLNHLVASCASAVGERVASTYE
ALSLKKMMNFYLPSGVSRSGGLAGTVPGVGDNTTERVRQEDSMQGKKSSSTGDIREEEAE
GLRRRLSLPGLLSQGRYAVHLLSSSYALLLSPRLLRKAGRPRMRAVALTPLGGAVPEAQE
VLPTLQTEVWSWGHGEHGQLGHGDNLARLQPLCIKSLNNKEVVRVAAGAHHSLAVTAQSQ
VFSWGSNSSGQLGHMESPSTVPRLAKLSDGIRVWDVSAGERHTLLLADGDCIQPIIYYSG
QQVKEGEEESQAKEPGQGEGGEEEEERAGGYTPQPVLLPFCMNLGYVSSVFAGGRRCVAL
SDRNVMGFIASLHELAAAERKFYCKLCNVKTQIIRPLLELESLSSALGQVTLGLLQTLAG
RFSLLCHLTGQHAASLTANLRRGRDVKSLLILDHAGIFLDSYNEYCSSLGNFQVMAGFQA
LTKPSLDFFGKSPELLQRLSECSEENPTMADLLVALFYLPTRHLHEYGRLLLKLATCFEV
CSNDYQKLQDSCSKFEALTLKLKRKRKEAEYTFHFWKSFPGKMTVNSLSDSLRKPHRRLI
CESSNKALTLQNAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPIPEENTGIHGLK
VITPEETFTLLASSAMEKTKWLRSINQAVDQALSGAGQDSTSVGSGSSGQKLEPPTSRTA
SYTFYKDGRLKEATYEGRWLNGKPNGRGVLKWPDGRIYTGEFKNGLEDGFGEFVAPNKTL
NKNDHYQGQWKDGKMHGLGTYRYASGEVYDGSFQDGMRHGHGMLRSGKLNTSSPSVFIGQ
WLQDKKTGYGVFDDITKGEKYMGMWQDHLRQGTGVVVTQFGLYYEGAFKDNKMMGTGILL
SEDDTTYEGEFSDDWTLNGKGVLTMANGDYLEGSFGGEWGTGLKVTGSYFKPHLFDTDKD
KTHTVKLGRLCVCAEDKWQAVFEECWSQLGCESSGQGENWKAWENIAVALTTSRRQIQDS
PEILSRSHSRTLESLEVIPQHVGPITMERYHTIRLYLIKACDTPLHPLGRLVETLVAVYR
MTYVGVGANRRLLPQAVNEIKSYLNRIFQIVRFLFPDLPEEGGLIPEPTANAEDKKEPDA
TDAPLESPKPGRVVSSSALLLPVLLPRLYPPLFTLYALDKEREDDVYWECVLRLNKQPDL
ALLAFLGVQQKFWPVNVPVSVPAAGEKQQVLSSTKDACFASAVETLQQISTTFTPSDKLQ
VIQLTFEEITQEVQSLLKQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQ
HGEHGIMFTTLKACYYQIQHEKIT
NT seq 5115 nt   +upstreamnt  +downstreamnt
atggaaacccagaggaagagctctggggatgatggtggtggagagcgaggcctgctccac
acctggaagggctactcctgcagtgtcaccccagaaaggctgctcctacctcgaccggtc
cttcaggtcgccctgggtgcacgacatggagttctgctggtggaaggaggacaggtgtac
agttttggggagctgccatggaagcagagtcaggtccctgagccagcgaaacccacgctg
gagagcgctctcagcgggcagcgcgtggtcgccgtcgctgccgggagtttccacagcggc
gcggtgacagaggatggtggcatccacatgtggggggacaatggcgcgggacagtgtggc
ctgtcgggcctcagcaccgtccccaacccgactcctgtggctctagtggactcggacacc
agccccccgcagacgttgccggtgctggagctggcctgcggggagaagcacaccctggct
ctgtctgtccagcgggaggtgtgggcgtggggcagtggttgccagctggggctcaacgcc
tccgtctttcctgtgtggaaaccacaaaaggttgaacacttagtcgggaggtgtgtgctt
caggtggcctgtggggcttcgcacagcctggctctggtgcgatgcctgggcccccaggac
atccaccggccccctgtggacaaatgcagacagtgtaaccagctgctgtacaccatgacg
gacaaagaggaccacgtcatcatctctgacagccactactgccccctcggtgtggagctg
actgaggatgaggggatgcttgaggcacctgcccccaccccaggactcaaaacatcccca
tctgagccggtcctcccctcccatacctccaccacaaactctgattccccagcagcacct
tctaaaagtgctgacccctcctctgggccctcccccacccaggactcagagaaaggggaa
tcagccttggctaacggagtgctgccgagctcagactctgaccctgcggctcagacgaaa
gatggcagtggagctgtatcagtggtcaagagttcactctatccagacgagcaggctgtc
aaagactatctaaagaagctgtcagacaacacacagacggatgcaaagatgacggctgga
ggactgcactctctgctgccttcagccggaggcctcacctccaccccgagctccacgctc
aaccacctggtggcctcctgcgcttctgccgtgggcgagcgggtcgcctccacctacgag
gccttgtccctcaagaagatgatgaacttctaccttccctcgggggtgtcaaggtcgggt
gggctcgctggcaccgtccccggagtgggcgacaacaccacagaacgcgtccgccaggag
gactccatgcagggcaagaagagctccagcacgggggacatccgcgaggaggaggccgag
ggtctgcggcgccgcctctcgcttccgggactcctctcacagggtagatacgctgttcac
ctcttatcctcctcctatgccctgctgttgtccccgcggctgctgaggaaagccggtcgt
cccaggatgcgtgccgttgccctcaccccactgggaggggcggtccctgaggcccaggag
gtgctgcccaccctgcagacggaggtgtggagctggggccacggcgagcacggacagctg
ggacacggagacaacctagccaggttacagccactgtgcatcaagagtctaaacaataag
gaggtggtccgggtggcggccggcgctcatcattccctcgctgtgaccgctcagtctcag
gtgttttcgtggggcagtaacagctctggtcagctcggacacatggagtcacccagcaca
gtcccccgcctcgcaaagctgtcagacggcatccgggtgtgggacgtgagtgccggagag
agacacaccctcctgctggcagacggagactgcatccagcccatcatctattacagcgga
cagcaggtgaaagagggggaggaggagagtcaggccaaggagccgggtcagggggaagga
ggagaggaagaggaggagcgggcaggaggctacaccccacagcctgtactgctgcccttc
tgcatgaatcttggctacgtcagcagtgtgtttgcgggcggccgacgctgcgtggcgctc
tcggacaggaacgtgatgggcttcatcgccagcctccacgagctggctgcagccgagagg
aagttctactgcaagctgtgtaacgtcaagacacagataatacgccccctgctggagctg
gagtctctgagctcggctctcggccaggtgaccctcgggctcctgcagacgcttgcaggt
cgtttcagcctcctgtgtcacctgaccgggcagcacgccgccagcctcaccgccaacctg
cgccgcggacgtgatgtgaaaagtctgctcatcctggaccatgctggcatcttcctcgac
tcttacaatgaatactgcagctctctgggcaacttccaggtgatggcaggtttccaggcc
ctgaccaagccttcgctagatttctttgggaagagtcctgagctgctccagaggctgtca
gagtgcagcgaggagaaccccaccatggccgacctcctggtggcgctcttctacctccca
actcgccaccttcatgagtacggccggctgctgctcaaactggccacctgcttcgaagtg
tgctccaacgactaccagaagctgcaggacagctgctccaagttcgaagctttgaccctg
aagctgaagagaaaaagaaaggaggctgagtacacatttcacttctggaagagcttccct
ggcaaaatgacggtaaactcgctgagtgactcgctgaggaagcctcaccgccggctcatc
tgtgagagcagcaacaaggctctgaccctgcagaacgccgggaggttctccgtcaactgg
ttcatccttttcaacgacgccttggtccacgcacagttctccacccatcacgtgttccct
ttggccacactgtgggtggagccgatcccagaggagaacactggcatacatggtttaaag
gtgatcacaccagaggagacgttcaccctgctcgcctcctccgccatggagaagaccaag
tggcttcgctccatcaaccaggcagtggaccaggccctgagcggggccgggcaggactcc
acatcagtcggctcggggtcgtcaggacaaaagctggagcctcctacttccaggacggcc
tcctacactttttacaaagatggacgactgaaagaggcgacgtacgaaggccgctggctc
aatggcaaacccaacggcaggggggtgttaaagtggcctgatgggcgaatatacaccgga
gagttcaagaacggactggaagatggctttggtgagtttgtcgctcctaataagacactc
aacaagaacgatcactaccaaggtcagtggaaagacggcaagatgcacggcctggggaca
tacaggtacgccagcggtgaggtttacgacggttccttccaggacggcatgcgacacggc
cacggcatgctgcgcagtggcaagctcaacacctcctcccccagtgtcttcattggccag
tggctgcaggacaagaagaccggctacggagtctttgacgatatcaccaaaggagaaaag
tacatgggcatgtggcaggaccacctgcggcagggcaccggggtcgtcgtcacccagttc
ggcctgtactacgaaggagccttcaaagataataagatgatgggcactgggatccttctg
tcagaggacgacacgacgtatgaaggggagttctctgacgactggaccctcaacgggaag
ggtgtactgaccatggcgaacggcgactacctggagggctccttcggtggcgaatggggc
accggcctcaaggtgacggggtcctacttcaaaccacacctgttcgacactgacaaggac
aagacccacactgtgaagctggggcgtctgtgtgtgtgtgcagaggataagtggcaggcg
gtgttcgaggagtgctggagtcagcttggctgcgagtcgtcgggccaaggagaaaactgg
aaggcgtgggagaacatcgccgtggccctcaccaccagccggcgacagatccaggacagt
ccggagatcttgtctcggagtcacagcagaaccctggagagtctggaggtcatcccgcag
cacgttggacccatcactatggagagatatcacaccatccgcctctacctcatcaaggca
tgcgacacccctctccacccactgggccggctggtggagaccctggtggcggtctacagg
atgacctacgtgggcgtcggagcaaacagacgactcctgcctcaggctgtcaacgagatc
aagtcttatctcaaccgcatcttccagattgtcaggtttctgttcccagacctgccagaa
gagggcggtctaattccagagccgactgccaacgccgaggacaagaaggagccagacgcc
actgacgccccactggagtcacccaaacctggccgtgtggtgagcagctcagctctgctg
cttcccgtcctgctgcctcgtctctacccgccactcttcaccctctacgctctggacaag
gagagagaggacgacgtgtactgggagtgtgttctccgcctcaacaagcagcccgacctc
gccctcctcgccttcctcggtgtccagcaaaagttctggcctgttaatgttcccgtctct
gtgcctgcagccggggagaagcagcaggttctctccagcacaaaggatgcctgctttgcc
tctgcagtggaaacgctgcagcagatcagcacgacgttcaccccgtctgacaagctgcag
gtgatccagctcacctttgaggagatcacacaggaggtccagtcgctgctgaagcaggac
ttcttgtggtccatggacgacctcttccccgtcttcctctacgtcgtgctgcgagctcgt
atcaggaacctggggtcggaggtcagtctgatcgaggacctgatggacccctgtgtccaa
cacggagagcatggaatcatgttcaccactctcaaggcctgttactaccagatccagcat
gagaagatcacttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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