KEGG   Lates calcarifer (barramundi perch): 108895017
Entry
108895017         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator Myc-A
  KO
K04377  Myc proto-oncogene protein
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04010  MAPK signaling pathway
lcf04012  ErbB signaling pathway
lcf04110  Cell cycle
lcf04218  Cellular senescence
lcf04310  Wnt signaling pathway
lcf04350  TGF-beta signaling pathway
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108895017
   04012 ErbB signaling pathway
    108895017
   04310 Wnt signaling pathway
    108895017
   04350 TGF-beta signaling pathway
    108895017
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108895017
   04218 Cellular senescence
    108895017
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108895017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108895017
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108895017
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Cell cycle controlling factors, Myc
    108895017
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     108895017
SSDB
Motif
Pfam: Myc_N Myc-LZ HLH Sporozoite_P67 BrxC
Other DBs
NCBI-GeneID: 108895017
NCBI-ProteinID: XP_050922873
Position
LG24:14705664..14708340
AA seq 429 aa
MPLNSSLASKNYDYDYDSLQPYFYFDNEEEDFYPQQLQPPAPSEDIWKKFELLPTPPLSP
SRRPSLSSLFPSTADQLEMVTEFLGDDVVNQSIICDADYSQTFLKSIIIQDCMWSGFSAA
AKLEKVVSERLASLHAARKESAVGDGSAEPTAPASAAAAAAAWRLNSSYLQDLNTSASEC
IDPSVVFPYPIAETPKQSAGTPPTKDLGLDTPPNSGSSSSSCSDSEDEDGDDDDEEEEEE
EIDVVTVEKRQAVKRCDPSPLETRHPSPLVLKRCHVSTHQHNYAAHPSMRHEQPAVKRLK
LESSSSSSGGGGGGGSHGHSRVLKQISSNRKCLSPRTSDTEDYDKRRTHNVLERQRRNEL
KLSFFALRDEIPEVANNEKAAKVVILKKATECIYSMQTDEQRLLSLKEQLRRKSELLKQR
LAQLQGSRA
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgccgctgaattcaagtttagcgagtaaaaactatgactatgactacgactctctccaa
ccctatttctactttgacaacgaggaggaggatttctaccctcagcagcttcagcctccg
gcaccgagcgaagacatctggaagaaatttgaactgctgccgacccctcccctctccccg
agccgccggccgtccctgtcaagcctcttcccctccacggcggatcagctggagatggtg
accgagttcctcggcgacgacgtggtcaaccagagcatcatctgcgacgccgactactcc
cagacctttctcaagtccattatcatccaggactgcatgtggagcggcttctccgccgcc
gccaagctggagaaggtggtctccgagcggctcgcctccctgcacgccgccaggaaggag
tcggcggtgggtgacggcagcgcggagcccaccgctcccgcctccgccgccgctgctgct
gcagcgtggaggctgaacagcagctacctgcaagacctgaacacatccgcttcggagtgc
attgatccatcagtggttttcccgtatcccatcgcagagacgcccaaacagagcgcaggg
acgccgcctactaaggatttgggactggacacgccaccaaacagcggcagcagcagcagc
agttgtagtgactcagaagatgaggatggagatgatgatgatgaggaggaggaagaggag
gagatcgatgttgtcacagtggagaagaggcaggcagtgaaacgctgtgaccccagcccg
ctggagaccaggcatcccagcccgcttgtgctgaagaggtgccacgtctccacccaccag
cacaattatgccgcccatccatccatgaggcacgagcagccggctgtcaagaggctgaag
ctggagagcagcagcagcagcagcggtggaggaggaggtggcggcagccacggccacagc
agggtcctcaaacagatcagcagcaaccgcaagtgtttgagcccccggacgtctgacaca
gaggactatgacaagagaaggactcataacgtactggagcgccagaggaggaacgagctc
aagttgagcttcttcgccctgcgggatgagatcccagaggttgccaacaacgagaaggcg
gccaaagtggtgatcctgaagaaggctacagagtgcatttacagcatgcagacggacgaa
cagagactcctctcactcaaagagcagctgaggaggaaaagtgaacttctaaagcagaga
ctcgcacagctgcagggttctcgtgcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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