KEGG   Legionella cherrii: NCTC11976_01744
Entry
NCTC11976_01744   CDS       T06506                                 
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lcj  Legionella cherrii
Pathway
lcj03420  Nucleotide excision repair
lcj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lcj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCTC11976_01744
   03430 Mismatch repair
    NCTC11976_01744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcj03400]
    NCTC11976_01744
Enzymes [BR:lcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCTC11976_01744
DNA repair and recombination proteins [BR:lcj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC11976_01744
   MMR (mismatch excision repair)
    Other MMR factors
     NCTC11976_01744
SSDB
Motif
Pfam: UvrD-helicase AAA_19 Viral_helicase1 AAA_11 UvrD_C
Other DBs
NCBI-ProteinID: VEB36505
Position
1:complement(1954595..1956484)
AA seq 629 aa
MDEPDYSMCVDEEIYNCLNLDNPKSFFLFAGAGSGKTRSLVEVLKKFREKNIQRLQLQRQ
KIAIITYTNAACDEIKRRLDFDPSFSISTIHSFAWELIKPYQSDIKEWLKNNLKSEIAEL
NEAQGKGRPGSKTSEDRSRKINSKLDRINSLESIKKFIYNPNGDNNSKDSLNHTEVISIT
VDFLMTHSLMRKILVRTFPILLIDESQDTKKELIDAFFEIQKMHSDIFSLGLFGDTMQRI
YTDGKSNLGQNIPISWAKPEKKINYRCPKRIIKLINQIRSAVDAQVQESAKSEYGFVRLF
IADTKKDLDKTAFEFRVSEKMAEITGDTNWKELSNEVKILTIEHHMAAKRGGFSDFFNPL
YEIDQFKTGVLDGTLQGISLFSNQILPLINALRANDKFQVSRIVKKYSPLLSKEVIKKSL
TPREKIITANAAVQKLYDLWNEGNSPSLIQILNEIYQSDLFQIPNIYMPIAARLKTQENM
QTISLENHSDEDKIINAWDNALKSSFIQFEAYFNYISDNSRFGTHQGIKGLEFPRVMVIL
DDEESRGFLFSYEKLFCAKELTEADKKNIQEGKETTVDRTIRLFYVTCSRAEESLAIIAY
SKDPIKVKSHAISQGWFDENEIIDNLQEC
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggatgaaccagattattctatgtgcgttgatgaagaaatatacaattgtcttaacttg
gataatcctaaaagcttctttttatttgcaggcgcaggttccgggaaaaccagatcgttg
gtcgaagtactaaaaaaattccgtgaaaaaaatattcaacgcttacagcttcaaagacag
aaaattgccattatcacatataccaatgccgcatgtgatgaaataaaacgtcggcttgat
tttgatccatctttttcaatatcaactatacacagtttcgcttgggaattaattaagcca
tatcagagtgacataaaagaatggttaaaaaacaatctaaaatcagagattgcagaactt
aatgaagctcaaggaaaaggccgtccgggttctaaaacttcagaagataggtcaagaaaa
ataaattcaaagttagacagaattaattctttagaaagcatcaagaaatttatttacaat
cctaatggagataataattccaaagattcgcttaatcatacagaagtcataagtataaca
gtagacttcctaatgactcattcccttatgaggaaaattttagttcgaacattcccaatc
cttttaattgatgaaagccaagacactaaaaaagagctaattgatgctttttttgaaata
cagaaaatgcactcggatattttctcgcttggactatttggtgacacgatgcaacgtata
tatacagatggaaagtctaatttgggtcaaaatataccaatctcttgggcaaaaccagaa
aagaaaatcaactaccgatgtcctaagagaattatcaaacttatcaaccaaatcagatca
gcagttgatgctcaggttcaagagtctgctaagtcagaatatggatttgtacgtttattt
atcgcagatacaaaaaaagatcttgataaaacagcatttgaatttagagtctcagaaaag
atggctgaaataacaggtgacactaattggaaagagttgagcaatgaagtaaaaatactg
accattgaacatcacatggcagcaaaacgtggtggattttccgatttcttcaaccccctt
tatgagattgatcaattcaaaactggtgtacttgatggaacccttcaaggaatatcattg
tttagtaatcaaattcttcctttaattaatgcattacgggctaatgataaatttcaagtt
tcaagaatcgttaaaaaatactctcctctcctttcaaaggaggtaataaaaaaaagttta
actccccgtgaaaaaataattacagctaacgcagcagtgcaaaaactttacgacttgtgg
aatgaaggtaatagcccctcattaattcaaattcttaatgaaatatatcagagcgattta
tttcaaattcctaatatttacatgccaattgctgcacgtttaaaaacccaggaaaatatg
cagactatttccctcgaaaatcattccgacgaggataaaatcattaacgcttgggataac
gctctaaagagttcgttcattcaatttgaggcttatttcaattatatatccgataactct
cgatttggcacacatcaaggaataaagggcctagaattccctcgtgtaatggtcattctg
gacgatgaggaatcacgtggattcctcttcagttatgaaaaattgttttgtgctaaagaa
cttacagaggctgataaaaaaaatatacaggaaggtaaagaaacaactgttgatagaact
atcagacttttttatgtaacctgtagccgtgctgaagaaagtttagcaattattgcttac
tcaaaggatccaataaaagtaaaaagtcatgcaatatcccaaggatggtttgatgaaaat
gaaattattgataatcttcaggagtgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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