KEGG   Latimeria chalumnae (coelacanth): 102358495
Entry
102358495         CDS       T02913                                 
Symbol
SIM1
Name
(RefSeq) single-minded family bHLH transcription factor 1
  KO
K09100  single-minded
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcm03000]
    102358495 (SIM1)
Transcription factors [BR:lcm03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    102358495 (SIM1)
SSDB
Motif
Pfam: SIM_C PAS_3 PAS_11 PAS PAS_9 HLH PAS_4 Per3-like_PAS-A A_deaminase_N
Other DBs
NCBI-GeneID: 102358495
NCBI-ProteinID: XP_005995311
Position
Un
AA seq 763 aa
MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
GEAWGHSSRTSSLDNVSRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
GNSIFEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTETEYKGLQLSLDQVTATKPSFSYANST
PAIVDNRKGNKSRLNRTKSKSRTSPYPQYSGFQTERSESDHDSQWGGSPLTDTASPQLLE
HAEGSHTQSHDVSCAYRQYSDRSGLCYGFTLDHSRLTEERHFHTQTCEGGRCEAGRYFLG
TPQSGRENWWNSRSALPLAKSSPESREGYENSMPHIASVHSIHGRGHWDEESVVSSPASE
SGDRYRNDQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKNTPDQPRSINGVGKTHSM
AFGTHYTQPQLTGVVCRGPSVATASPCEHLQQRDGKIMSPHDNEYDNSPTSLSRISSPNS
DRISKSGLALVKDYLQSDMSPHQATGNHCASSPSYYTSHKQYFDKHAYALTGYAFEHLYD
NETIRNYSLGCNGTHFDVTSHLRMQQDPAQGHKGTSVIITNGS
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgaaggaaaaatccaaaaatgctgcccggactagacgggagaaagaaaacagtgaattt
tatgaactagctaaactactgccgttgccctcagcaattacttctcaactggacaaagcc
tcaataatcagactaactaccagctacttaaaaatgagagttgtttttcctgaaggactt
ggagaagcctggggtcattccagtcgaactagttctttggacaatgtgagtagagaacta
ggatcccatctcttacagacgttagatggtttcatctttgttgtggctccagatggaaaa
attatgtacatttctgaaacagcatcagttcacctgggtttatcacaggtagaactgact
ggcaatagcatttttgaatacattcaccctgctgaccatgatgagatgactgctgtgcta
acagctcatcaaccctaccattcacattttgttcaggaatatgaaattgaacgttcattc
ttcttacgaatgaaatgtgtgttggctaagagaaatgcaggcttgacttgtggtggatac
aaggttattcactgcagtggttacctgaaaattcgccaatatagccttgatatgtcacca
tttgatggatgttaccagaatgttggtttagtagcagttggccactcattaccaccaagt
gcagtcactgaaattaaacttcatagcaatatgtttatgtttcgagccagtcttgatatg
aaactcatatttttagattccagggttgctgaattaactggctatgaacctcaagacctg
atagagaagactctttatcaccatgtacatggatgtgacacatttcatttacgttgtgcc
caccatttattgctcgtcaaaggccaggtgacaacaaaatactacaggtttcttgctaag
catggaggctgggtttgggttcagagttatgccacaatagtccacaacagcagatcctcc
agaccacattgcatagttagtgttaactatgtcctaacggaaactgagtacaagggacta
caactctcactggatcaagtcacagcaacaaaaccatcattctcctatgcaaactcaaca
cctgccattgtagataataggaaaggaaacaaatctcgccttaaccgcacaaaatcaaaa
tcacggacatcaccttatcctcagtattcaggatttcaaacagaaagatcagaatctgat
catgacagtcaatggggtgggagtccactgactgacactgcctctccacaattattagaa
catgcagaggggtcacatacccagtcccacgatgtctcctgtgcctatagacaatactct
gacagaagtggtctttgctatggttttactcttgaccattctaggctaactgaagagagg
cacttccacactcagacctgtgaaggaggcaggtgtgaggctggtcgatatttccttggc
actcctcagtctggaagggaaaattggtggaattcacgctcagcattgccattagcaaaa
tcatctcctgaaagcagagagggatatgagaacagtatgccacacatagcttctgttcat
agtattcatgggagaggacattgggatgaggaaagtgttgtcagctcacctgccagtgag
tcaggagacagataccgtaatgaccagtatcagagtagtcctcatgaacctagcaaaatt
gaaacactgatcagagctacgcagcaaatgattaaagaagaggaaaatcggttacagtta
aggaagaacactcctgatcagccaagatccataaacggagttggaaaaacgcactccatg
gcctttggcacacactacacacaaccacaactaacgggagttgtctgtcgtggcccctct
gttgctactgcttcaccatgtgaacaccttcaacaaagagacggaaagattatgagtccg
catgacaatgagtatgacaatagtcctacttcactgtccaggatcagtagcccaaattct
gaccgaatttcaaaatcaggtctagcattagtaaaagactacttgcaatcagatatgtct
cctcatcaagcaacagggaaccactgcgcatcttcccccagttattacacatctcacaag
cagtactttgacaaacatgcttatgcactgaccgggtatgcttttgagcatctgtatgat
aatgaaaccattagaaactattcattgggctgcaatggtacgcactttgatgtgacttct
catttaaggatgcagcaagatccagcacagggacacaaggggacgtcagttatcataact
aatggaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

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