KEGG   Latimeria chalumnae (coelacanth): 102363375
Entry
102363375         CDS       T02913                                 
Symbol
CHD6
Name
(RefSeq) chromodomain helicase DNA binding protein 6
  KO
K14436  chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcm03036]
    102363375 (CHD6)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    102363375 (CHD6)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Chromo BRK ResIII DEAD CHDCT2 HDA2-3 MUN
Other DBs
NCBI-GeneID: 102363375
NCBI-ProteinID: XP_014340717
Ensembl: ENSLACG00000010881
Position
Un
AA seq 2819 aa
MKILKKEKQLPAAKVSNHTLMSDGPVGLEQKSLSSSSSKKEMESLHHQAKGSEFKSHCEG
QKDPRPREQSTVMQKGKSSLNGSEDSGGGGTGVKKKRKKKELKNQDELEQGSRDKETKPK
KKRDTKEPKEPKKVKEPKEAKKPRKPREPKERKEPREGKEKKNTAESSSKGKGKKAGKVP
GPTPVEKKKKGKRKSENPPEDLETEDVELAPSSPNGAETPESSDGQKRRSGRQVKRRKYN
EDLDFKVVDDDGETIAVLGTGRASALSASTLAWQAEEPPEDDANIIEKILAVRMTPKELV
PGEAPVEIEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRTKQAHLKHIFSQLDE
DLFNPDYVEVDRVLDVAHTKDTETGEEVTHYLVKWCSLPYEESTWELEEDVDPVKVKEFE
DLQVLPQRGLVERPPSEAWQKLEKSRGYKNNNQLREYQLEGMNWLLFNWYNRKNCILADE
MGLGKTIQSITFLSEIFQMGIQGPFLIIAPLSTITNWEREFRTWTEMNVIVYHGSQISRQ
MIQQYEMLYRDVQGSPIPGLFKFHVIITTFEMILADCPELRKISWNCVVIDEAHRLKNKN
CKLLEGLKLMGLEHKVLLTGTPLQNSVDELFSLLNFLEPIQFPSETTFLEEFGDLKTEEQ
VKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLAKGAN
QHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKSHDPDTADFQLQAMIQAAGKLVL
IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK
PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRL
ITRNSYEREMFDKASLKLGLDKAVLQDINRKGNTNGVQQLSKMEVEDLLRKGAYGALMDE
EDEGSKFCEEDIDQILQRRTQTITIQTEGKGSTFAKASFIASGNRTDISLDDPNFWQKWA
KIAELEIDSNAEKDSLVLDRPRVRKQTRHYNSFEDDELMEFSELDSDTDERPSRSRRLNE
KHRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLAYCVKHYKG
DDKIKSFIWDLITPTKDGENQALQNHSGLSAPVPRGRKGKKVKNQMLLPEIKNADWLASC
NPEIVLYDDSYKKHLKQHCNKVLLRVRMLYYLKSEVLGEAANKALDGTSASELHVALPDI
DFLEVPSEWWNAAADKSLLIGVYKHGYERYNAMRADPTLGFLERVGMPDEKSLSAEQSGT
DAVADLTERNDVAKEDNTEEVFAELSLQDQPEDSSVSCVEPVAKREDITAAQVGVDPDRP
CWPVASALTARLRRLITAYQRCNRKELIRTEFLVPGNNGFWYPQEEMFRRAAEMDPLMKE
LQKRWTRREQADFYRTVSSFGVIYDPEKKCFDWSQFRTFSRLERKTDESLEKYFYSFVAM
CRNVCRLPPRKDECPADPAIFVEPITEERAARTLYRIELLRKVREQVLRHPQLTERLKLC
RPSLYLPVWWECDKHDRDLLIGAAKHGLSRTDYYIMNDPQLSFLEAYRNYGQHENTRFQS
VDTPCCLYQNDCKQCDSPGFNYMEVKVQSTGGDYTMEGQEKTVSSVDEAFGLEKESQDVT
CEDLRVKMDSLISSSPTERSDSLSVLHDGKCSSAALLGSAQHSDAGLLSTQDALCCAQAI
ELAAEGIKVESDILSKAQSISEADVATESLAPRNLQTNWEESDEQNLDSHLLTDPQTKGT
KQESQTDLHSGFDHTRADCNDIMASPAPVEVVGAVNINGGLALKCDCVSPEIMESSGSGL
DSASGGTSKMILNHDCGGEIISTDVEKDLEAGIEGTGKGQPRSAIFNMSQNEAVTEEGLT
TQTDPTKSELQRTINLESELHSSRDVKPMFINIPSENETTEGKEGSWTELDLKQNLKEKG
TIMGLCELSNGLMMVGPHSEYLSIDLASDLKVEPGESSEENSNLYSEPETCGLKEQGVKL
ETELSLCEEEEEEEEEDGEGTIQSGQPKAVLVKSFEEGSKPSITAPLDEAQEDFLQDARA
PTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHVVLKGKWPSSCQQFDTSGLESARGSVG
NTNIRNCFSSGPAQEALSPNANKGAVASSIQKECLMPTAFQRDPRRRRRPYELETESDTK
HRSLEELAASHARSPVILNGWQDAAVDLSRSSEMTLGPPTFHVGTNAQKLGSVRTLPNSL
GMDLSGILQAGLIHPVTGQIVNGNLRREDSAVRRRRGRRRNIEGIESLFIKNQTLQDQVQ
FTPHTQRKNGGIFPVEYPLHPLLARSLATDPLSMTHAQFILHSPSGTEVPKQPLQSSVQA
DRQSSATPVQFPENASSLQLEKEVANRSLLDWLRQHPDFTMNAPPFSSSFSDRPKQRRQR
CKDPSKLDINTLTGEERVPVVHRGTGRRLGGAMAPALKELSRWLDANPDYAVAPDWSDVV
KHSGFLPENKFNCILTEPVPRDTGPRRRGRRPRSEMVKAAGLVADHSSTMAPLFMNGLIA
GMDLVGLQNIRNMQNITLTGLVGFPASFTAVSTSEEVKNSLLPMMLPGMSTVPHVFGVGG
LLNPSLSTTTTCTSTASSTLTSTTKSSPLNPPKAQENLSSNDINKDDSVKDKQGPGSFSE
PSEPAVTTSSPVAFNPFLIPGVSPGLLYPSMFLSPDIRMACLQQARHSEMPNPESPKRKK
KKAKEVPDAVAPPENSAQEKEENGDHESNGEEMAASLIKVEPYEQANEPDLKESVLSAD
NT seq 8460 nt   +upstreamnt  +downstreamnt
atgaaaatcctgaagaaagagaaacagcttccagcagctaaagtgtcgaaccacaccctg
atgtcagatggtcctgttggcttggaacagaagtcgctgtcgtcctcgagcagtaagaag
gaaatggaaagcttacatcatcaggcaaaggggtcagagtttaagagtcactgtgagggt
cagaaggacccacggcctcgggaacagagcactgtgatgcagaaaggaaagtcctctctt
aatggctctgaggacagcggcggcgggggtacaggggtgaagaaaaagcgaaaaaaaaag
gaactcaagaatcaagatgagttggaacaagggagcagggacaaagaaaccaaaccaaag
aaaaaaagagacactaaagagccgaaagagccgaaaaaagtgaaggaacctaaagaggcg
aagaaacccagaaaaccacgagagccaaaggaacgaaaggagccacgagagggaaaggaa
aagaaaaacactgccgagtcttcatccaaagggaagggcaagaaagcaggtaaggtgcct
ggcccaactccagttgaaaagaagaaaaaagggaaaaggaaaagtgaaaatcctccagag
gacctcgaaacagaagatgtggaattggcaccttccagtccaaatggagcagaaacccct
gaatcttcagatggacagaagcgtcgctcagggcgtcaggtaaagcgaagaaagtacaac
gaagacctggatttcaaagtagtcgacgatgatggagaaacgatagctgttctaggaacg
ggaagagcgtcagcgctgtcagcctctactctggcgtggcaggcagaggaaccccctgaa
gatgatgccaacattattgagaagattttggcagtgcgtatgactccgaaagagctagta
cctggggaagcaccagtggagattgaagaattttatgtaaagtacaggaatttctcctac
cttcactgtaaatgggcaactctggaagagctagaaaaggacccgcgaatccaccagaag
atcaagcgtttccggaccaaacaggcccacctgaagcatatatttagtcagctcgatgaa
gacttgtttaaccctgactatgtggaagtggacagggtgttggatgtggcccacactaaa
gacactgaaacaggagaggaagtgacgcattatctggtgaaatggtgttccttaccatat
gaagaaagcacctgggaactggaggaggatgttgatccagttaaagtgaaggagtttgaa
gacctgcaagtcctacctcagcggggacttgtggagcggcctccatcagaggcatggcaa
aagttggaaaaatcacgtgggtacaagaacaacaaccaactgagggaataccagctagag
ggaatgaactggctgctcttcaactggtacaacagaaagaattgtatcttggccgatgaa
atgggcctaggtaagaccatccagtccatcacgtttctgtccgaaatcttccagatgggg
attcagggccctttcctcatcattgccccactctccactataactaactgggagcgggag
ttccgcacttggacggagatgaacgtgattgtgtaccatggcagccagatcagcaggcag
atgattcagcagtatgagatgctttatagagatgtgcagggtagtcccattccaggattg
tttaaatttcatgtgatcatcaccacatttgagatgattctggctgactgtccagagctc
cggaagatcagttggaactgtgtggtgatcgatgaggcccaccgactcaaaaacaagaac
tgcaaacttctcgagggactcaagctcatgggcctggagcacaaggttctgctgacaggg
actccattacagaactctgtggatgagctcttcagcttgttgaacttcctggagccgatt
cagttcccttctgagactaccttcttagaggagtttggagatctgaaaaccgaggagcag
gtaaaaaaactgcaggccattctgaaacccatgatgctgcgtcgattaaaggacgatgtg
gagaaaaacttggctccaaaagaggagactattattgaggtggaactgaccaacatccag
aagaaatattaccgagccatcctggagaagaacttcaccttcctggccaaaggggcgaac
cagcacaacatgccaaacctcatcaacacaatgatggaactgaggaaatgctgtaaccac
ccgtatctgatcaatggtgccgaggagaagattttggaagattttcggaagagccatgat
ccggacacagcagatttccagttgcaggcgatgattcaggcagcagggaagctggtgctg
attgacaaactgctgcccaagctgatagctggggggcacaaggtgttgatcttctcccag
atggtgcgctgtctcgacatcctggaagattacctcatccagagacgttacacatatgag
cgtatcgatgggagagtgagaggaaatcttcgccaggctgcaattgatcggttctgtaag
ccagattctgatcggtttgtatttctgttgtgcacgagagccggtggcttgggtattaac
ctgacagcagctgatacatgtatcatctttgattcagactggaacccacagaacgacttg
caggcacaggctcgctgtcaccggattggtcagaacaaagcagtgaaagtgtatcggttg
ataacccggaactcctatgagcgagagatgttcgacaaggcgagtttgaagctgggactt
gacaaggctgttttgcaggacatcaacaggaaaggaaacactaatggggtgcagcagcta
tctaagatggaggtggaagatttgctgcggaagggggcatatggggctttgatggatgaa
gaagatgagggttccaagttctgtgaggaagatattgatcagatcctacagcgccgaact
cagaccatcactatccaaacggaagggaaagggtccacatttgctaaggccagtttcatt
gcatcaggaaacagaacagacatttctttagatgacccaaacttctggcagaagtgggca
aaaatagcagagctggagatcgactctaatgctgaaaaggacagtctagttcttgacagg
cctcgggtgcggaaacaaacacgacactacaattcatttgaagatgatgagctaatggaa
ttctcggagctggacagcgacactgatgagaggccatcgcgatctcgacgcctgaacgaa
aagcaccgaagatacctccgagctgagtgcttccgtgtagaaaaaaacctcctcatattt
ggctgggggaggtggaaagacattctgactcatgggcggttcaagtggcatctgaacgag
aaggacatggagatgatatgccgtgcgctgctggcgtactgcgtcaaacactacaaaggg
gatgacaagatcaagagctttatctgggatctgatcactccaaccaaggatggagagaac
caggccctacagaaccactcgggtctctctgcccctgtgcccagagggaggaagggaaag
aaggtaaagaatcagatgctgcttcctgagatcaagaatgctgactggctggccagctgc
aacccagaaatagtgctgtatgatgacagctacaaaaagcacctgaagcagcattgcaac
aaggtgctgctacgagtgagaatgttgtactacctaaagtctgaagtgctgggagaagct
gcaaacaaagccttagatgggacatctgcaagtgagctccatgttgctctcccagatatt
gatttcctggaggtccccagtgaatggtggaatgctgcagctgacaagtcccttctcatc
ggagtatataaacatgggtatgagaggtacaatgctatgagagcagatccaactttgggt
ttcttggagcgtgtagggatgcccgatgagaaatccctctccgctgagcagagtggaact
gatgctgtagctgacttgaccgaaagaaatgatgttgctaaggaagacaacactgaagag
gtgtttgcagaactgtcgttacaggaccagcctgaggacagttcagtttcctgtgttgaa
ccagtagcaaaaagagaagatattactgcagcccaggttggtgtggacccagacagaccc
tgctggccagtggcgtcggctcttacagcaaggctgcggcgattgattacagcttaccaa
cgctgtaaccgcaaagagctgatccgcacagaattcctagtaccaggtaacaatgggttc
tggtatccccaggaggaaatgttccgaagggcagctgaaatggaccctcttatgaaggag
ttgcagaaaaggtggaccagaagggaacaggcagatttctatcgtacagtctcctccttt
ggggtgatctatgaccctgagaaaaagtgttttgactggagtcagtttcggacattctct
cgtttggaaaggaagactgacgaaagcctagaaaagtatttctatagctttgtggccatg
tgcaggaatgtttgcagacttcctccaaggaaagatgagtgtcctgcagatcctgctatc
tttgtggagcctatcacagaggagcgtgctgcaagaactctgtaccgcatagagctgttg
cgaaaggttcgggagcaggtccttcgacatccacagctgaccgagcgtcttaaactctgc
cgtcccagcctatacctgccagtatggtgggagtgtgacaagcatgaccgggacctgttg
atcggagcagcaaagcatggcttgagtcgaacagactactatatcatgaacgacccacaa
ctgtccttcttggaggcctacagaaattatggccaacacgagaacacaaggttccaaagt
gttgacacgccatgctgtctgtatcagaatgactgtaaacagtgtgattctcctggtttt
aactacatggaggtcaaggttcaaagcacaggtggagactataccatggagggccaggaa
aaaactgtcagttcagtagatgaagcttttggtcttgaaaaggagtcacaggatgttacc
tgtgaagacctacgtgtgaaaatggacagtctaatttccagtagtccaacagagagatca
gattccctatctgtgttgcatgatgggaagtgtagcagtgcagccttgctgggaagtgct
caacacagtgatgctgggctcttatcaacacaagatgctttatgctgtgctcaggctata
gaactagctgctgaaggcattaaggttgaatcagacatcctcagtaaagcacagagcatc
agtgaagctgatgtggcaactgaatcccttgctccaaggaatctgcaaacgaactgggaa
gagtcagatgagcagaacttggattcccatttgttaacagatccccagacaaaaggaacc
aaacaagaatcacaaactgacttgcacagcggctttgatcataccagggctgattgcaat
gacataatggcttctccagcacctgtggaagtggtgggagctgtaaatattaatgggggt
ctggcacttaaatgtgattgtgtcagtccagaaataatggagagcagtggctcaggactg
gatagtgcctcggggggtacatctaaaatgattctgaatcatgattgtgggggcgaaatt
atatccactgatgtagagaaagacctcgaggctggaattgaaggcacaggtaaagggcag
ccaagaagtgctatatttaatatgtcgcaaaatgaggctgttactgaagaaggattaaca
acacagactgatccaaccaagagtgaactacaaaggacaataaatttagagagtgagctt
cacagttcaagagatgtgaagcccatgtttataaacatacccagtgaaaatgaaaccact
gagggtaaagaagggagctggacggaattggacctgaaacagaaccttaaagaaaaaggt
accataatggggctctgtgaactttcaaatggtctcatgatggtaggcccccactcagaa
tatttaagcattgatctcgccagtgacttaaaggttgagcctggagaatcttcagaagaa
aattcaaatctgtactccgagccagagacctgtgggctgaaagaacagggagtaaaactg
gaaacagagctcagcctatgtgaggaggaagaggaggaggaggaggaggatggagaaggg
acaattcagtctggtcagccaaaagcagttcttgtcaaaagttttgaagaaggaagtaaa
ccatctattactgccccacttgatgaagcccaagaggactttcttcaggatgccagagct
ccgaccatagcacagcttttacaggagaaaaccctctactccttctctgagtggcccaag
gatcgagtgataataaaccgcattgacaatatctgtcatgtagtcttgaagggcaagtgg
ccttcatcttgccaacagtttgacacttcaggtttggaatccgctcgtgggtcagttggc
aacacaaacattcgaaactgcttcagcagtggcccagcacaggaagcattgagccccaat
gctaacaaaggagccgtggcctctagtatccaaaaggaatgcctcatgcccacagctttc
caaagggatcccaggcgccggagacggccttacgaactggaaacggagagcgataccaaa
caccggagcctggaggagttggcagcctctcatgccagatctcctgtcatcttgaatggc
tggcaagatgcagcagtggacctctccaggtcttcagagatgaccctgggaccccctact
ttccatgtgggcaccaacgcacagaagttaggatctgtccgaactcttccaaattccttg
ggaatggatttatctgggattctgcaggcaggactgatccatccggtaactgggcagatt
gtcaatgggaacttgaggcgagaggattcagcagtgcgaaggagaagaggaagaagaaga
aacattgaagggattgaatcattgttcataaagaaccaaacccttcaggatcaggttcag
tttacaccacacacacagaggaaaaacggtggaatattccccgttgaatatcctctccat
ccacttctcgcccgttccctagcaactgacccgctgtcgatgacccatgctcagttcata
ctccactccccaagtggtacagaggttccaaagcagcctttgcaaagctccgtccaagct
gaccggcagagcagtgctaccccagtgcagttcccggaaaacgctagcagtttgcagctt
gagaaggaggtagccaacaggagtctgctggactggctcaggcagcatcccgacttcacc
atgaatgcacctcccttttcttctagtttttcagacaggcctaaacagaggcggcagcgc
tgtaaggaccccagtaaactggacatcaacactctgacaggggaggagagagttccagtt
gttcatagggggaccggacggaggttaggtggagccatggccccagctctgaaggaactg
tccaggtggctggatgcaaacccagactatgccgtcgctcctgactggtcagacgttgta
aaacactcagggtttctgccagaaaacaagtttaactgcattctcacagaacctgttccg
agggacactggccccaggaggagagggaggcgcccacggagcgaaatggttaaagctgca
ggacttgtagcagatcactcctctacaatggctcccttgtttatgaatggacttatagct
ggaatggacctggtgggccttcagaacataagaaacatgcagaatatcaccttaactggc
ctggtgggctttccagctagcttcacagcagtcagtacaagcgaggaggtcaaaaacagc
ctgctacctatgatgcttcctggcatgtctacggtgccccacgtgtttggtgttggagga
ctcctgaatccttctctatccaccacaacaacttgcacatccactgcatcatctactcta
acaagcacaactaaaagcagccctttgaatcccccaaaagctcaagaaaatctgagtagt
aatgacatcaataaagacgactcagtgaaagataagcagggtcctggctctttctctgaa
ccctcggagcctgctgtcaccaccagcagtcctgtagcttttaaccctttcctgataccg
ggggtatctccgggcctgctatatccatccatgtttctctcgcctgatatccgcatggca
tgtctgcagcaggccaggcattctgagatgcccaaccctgagagcccaaaaaggaagaaa
aagaaagcgaaagaggtcccagatgctgttgccccacctgagaacagtgctcaggaaaaa
gaagagaatggagaccatgaaagtaatggagaggaaatggcagcttcattgataaaagta
gaaccttatgagcaagcaaatgaacccgatttaaaagaaagtgtcctcagtgctgattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (79)   

Download RDF
DBGET integrated database retrieval system