KEGG   Larimichthys crocea (large yellow croaker): 104919369
Entry
104919369         CDS       T04659                                 
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
  KO
K11432  [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco00310  Lysine degradation
lco01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lco00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    104919369 (prdm2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lco03000]
    104919369 (prdm2)
   03036 Chromosome and associated proteins [BR:lco03036]
    104919369 (prdm2)
Enzymes [BR:lco01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     104919369 (prdm2)
Transcription factors [BR:lco03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    104919369 (prdm2)
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     104919369 (prdm2)
SSDB
Motif
Pfam: PRDM2_PR zf-C2H2_4 zf-C2H2 SET zf-C2H2_6 zf-C2HE zf-C2HC_2 zf-C2H2_9 zf-C2H2_jaz
Other DBs
NCBI-GeneID: 104919369
NCBI-ProteinID: XP_027135001
Position
VI:complement(12783741..12800341)
AA seq 1705 aa
MMAITGGTVETLEEIPAHVWKGLPDSLSLRPSAINQSRIGVWATQLIPKGKRFGPFVGEK
KKRSQVTSNVYMWEVYFPARGWMCVDATDPVKGNWLRYVNWARSSEEQNLFPLEINRAIY
YKVLKPIGPGEELLVWYTVEDNPEITAALEEERASSLNRKNSPRAKRARRKLLEKARQAG
LGGFKKTSVSILTVKEMWDGEEGLREEDERPLASQELQEARPMGSTDHREDMSAVMTGRG
NGEEEEEDEEEEEEDDLEEPSEVQQQTAQCSAATVPSQKSKQPGLSLTCGEESHKDSQVK
SESSSLEGQEPEVDPDLDLDPDPDGDLEVDPHGESYPCQHCERHFSTRQGLERHNHIHAI
TNQQTQLFKCRYCSKSFGSQVGRRRHERRHESGPKKRPGSLAGTASLLSPVVQTDASSPD
CTSPSSHYIAIGSQFTGGSLHNSEVQRKELGPHADRPYILDENGESKELHPCKYCNKAFG
THTNMRRHQRRIHERHLLPKGVRRKGMLLQEASVKQQQQPDESPSTSPPTVYVPSADTED
EADRDDYTVDISKNISENLSFYIDGKIVSTSSVSTCEVIEVDSRSAALFGLDTVIISPNQ
ISQALKVEARTSAAKQASTIGQPAGKRRTSTPPLVPSLKVETETASSSSSSSSTSSSSNL
LVGGLFQQAADSSAFQREKTVYLSPKLKQLLQTQDIQKSAITLITESHRLASPLSVTPLP
GASGRFKRRTASPPSSPQLSPACKTESCKAEVVSSYALKVPKLENRSVSPLGSLHDKEDS
DSQSLSGNNTHGQTSSNSGGNSCNQQPLDLSNSVSRKCDSLNKVHGDSALDLSLHRKSSI
EPELKGSPAPQPLTKKKKPNTSMLEKVLMNEYVGLGEEGPAVLANLSCFHSRSPNVASES
AHPSPPSLTPVTMNPSSPSASSVTSPTPPPPVLPTIPSPPTMPSSPLSQPSDSAALRPLP
VLSPKMSPRSMEHKSLSDSEEILSAEENGEEEESHNPEPLDSPKTSLEDPLNFSVTSSPP
ESVSVDLPTAGDVSLTATCSSLLNGKMNQNLESVTKKSPAALSSQPESSSSSSSPPPTSH
DPPPSVVSHPQIKIKEEPQHCVDELSVMNHAPQDSVESTPHPSAPDKPSDKTSEAEDMDS
SYCKTFVCNVCEDPFNSIKELSGHITEHAADWPFKCEFCVQLFGDAPALLTHRTTLHGVG
RIFVCSVCSKEFAFLCNLQQHQKDLHPNETCSHTTVESGKLRPQNYTDPSRAKEESSPSS
PAPEMTDEAAPHNDSDLAKEEPDLNGNHAEEGAEDPNEELYTTIKIMASEGAKPKGPDVR
LGINQHYPSYKPPPFPYHSRSHAASVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPEL
HQHILACANASDKKRYTPKKNPIPLKQIVKSPNGVVSPSAATAGQSAFRRMGQPKRLNFN
QDTGKTKMSALSKKKNQLVQKAISQKNKAATFAKKGTVKVEEELPSNVCPHCSREFTYPA
SLSKHMVFSCPMKPVVKKGRKGLAEVKKEDRNTNLRKKALDYDIQQRETEQKPLGKTRAR
SSGASDPEPSQPSKGKTAATLGRLKRPASFPAPVSVSKKTKKGHVQSLPPTPSALDTPSD
TAQQRPAIRMQRMGKEAAPKRLAEAKSPPSQQLKKEERFSLRTRDRVGGPVTRSLQMANA
APSAEVKTEDPPIQEPKETQEVLMK
NT seq 5118 nt   +upstreamnt  +downstreamnt
atgatggccattactggagggacggtggagactctagaagaaattccagctcatgtgtgg
aaaggtttgcccgactctttgagtcttcgaccttctgctataaatcaaagccgtattggt
gtttgggccactcagctcattcctaaaggcaaaagatttggtccatttgttggagagaag
aaaaaaaggtcccaggtgacgagtaatgtttacatgtgggaggtttatttcccagcacgg
ggctggatgtgtgttgacgccacagaccctgtgaaggggaactggctgcgatatgtgaac
tgggcacgctccagtgaagagcagaatcttttccccctagagattaacagagccatttac
tacaaagtgttaaaacctatcgggcctggagaggagctgctggtgtggtacactgtggaa
gacaaccctgagataacagctgcactggaggaagaaagagccagcagtctgaacaggaaa
aattcacccagggcgaaacgagccagaaggaagctgctggagaaagccagacaggctggt
ttgggtggattcaagaagactagtgtaagcatacttactgtcaaggagatgtgggatggg
gaggaaggtctgagggaggaggatgagaggccattagcctcacaggaactccaggaagcc
cgtcccatgggaagcactgaccatagagaagacatgtcagcagtcatgacaggcagggga
aatggggaagaggaggaggaagacgaagaagaggaggaagaggatgatttggaggaaccg
agtgaagtacagcagcaaactgctcagtgttcagctgcgactgttcccagtcaaaaaagt
aagcagcccggcctgtcgctgacctgcggggaagaaagccataaagattcacaggtaaag
tcggagtcttcctctcttgaagggcaagaaccagaggttgatcctgatcttgaccttgac
cccgaccccgatggtgaccttgaggttgatccccacggagagtcctatccctgtcagcac
tgtgagcgccacttctccactaggcagggtctggaacgtcacaatcacattcatgccatc
actaaccagcaaactcaactgttcaagtgccggtactgcagtaaatccttcggctcacag
gtggggcggcggcggcacgagaggaggcacgagagcgggcctaagaaaaggcctggctct
ctggccggtactgccagtctactcagtcctgtggtgcagactgacgcctcaagtcccgac
tgcaccagcccaagtagtcactatatagccattggctcccagtttacaggaggatctctg
cacaactctgaggtgcagagaaaggagttggggcctcatgctgaccgtccctatatacta
gatgaaaatggggagtctaaggaactccacccctgcaagtactgtaataaagcatttggc
acacacaccaacatgcgcagacaccaacgcagaatacacgagcggcacttgttaccaaag
ggagtccgcaggaaaggcatgctgctgcaagaggcatcagtgaagcaacagcagcagccc
gatgagtcgcccagcaccagccctccgaccgtctacgtgcccagcgcggacacggaagat
gaggcggacagggacgattacaccgtcgatatatccaaaaacatttcagagaatttgagc
ttctacattgacggaaagattgtgtccaccagttcggtgagcacctgtgaggtaatagag
gtggactccagatctgcagctctgttcggtctggacacagtgatcatcagcccaaatcag
atcagtcaggcactgaaggtggaggcgagaacaagtgctgcaaagcaagcctctaccatc
ggccagccagcaggaaaaagaagaacgtctacgcctccacttgttcccagccttaaagtg
gagaccgaaacagcatcttcatcgtcttcatcctcctctacatcttcctcgtccaacttg
ttagttggagggctgttccaacaagctgcagattcatcagcatttcaacgagagaaaacc
gtttatctttcacctaagctcaaacagctccttcagacacaagacattcagaaatcagcc
attaccctgataacagaaagccatagactggcctcgccgctgtcagtcacaccgctgcca
ggagcatcgggcaggtttaaaagaagaacagcctctcctccgtcttctccccagctcagc
cctgcatgtaaaacagagagctgtaaagctgaggtggtgagctcatacgcccttaaggtg
ccaaagctggaaaaccgcagcgtgtcacctcttgggagcctacatgacaaggaagattca
gacagccagagcctttctggaaataatacgcatggccaaacgtcttccaatagcggcgga
aactcctgtaatcagcagcccttggatctgtcaaactctgtcagtaggaagtgtgacagc
ttgaacaaggtgcacggggattcagctcttgatttaagcttgcatcggaagagcagtatt
gagcctgagttaaagggaagtccagcaccacagccactgacaaaaaagaaaaagcctaac
actagcatgcttgaaaaggtgctaatgaatgagtatgtaggtctaggagaagagggccct
gcggtgttggcaaacttaagttgttttcattctcgctctccaaacgttgcatcagagtcg
gcccacccctctccgccttctttgacccctgtcaccatgaacccttcttcccccagtgcc
tctagtgtgacatcccccacaccgcctccgcctgtactacctaccatcccttctccgcca
actatgcctagctctcctctttctcagccttcagactctgctgcactgagacctcttcct
gtcctctcgccaaaaatgtctccaagatcaatggaacacaagtcactgtcagactccgag
gagattttgtcagctgaagaaaatggagaggaggaagagagccataaccctgagccactg
gactccccgaagacttcccttgaagatccccttaatttttcagtgacatcaagcccccct
gagtcggtgtcggtagatctgcccactgcaggagatgtttctctgactgcaacttgcagc
agtctgctaaatggcaaaatgaaccaaaatcttgagtctgtaacaaagaaatctcctgct
gctctttcctcgcagccagaatcctcatcttcctcatcatctcctcctcctacatcacac
gatccacctccatcagtggtttcccaccctcagattaagataaaggaagagcctcagcac
tgcgtagacgagttgtcagtcatgaatcatgcacctcaggatagtgttgagtctacacct
cacccgtctgcccccgataaaccgtctgataaaacctctgaggccgaggacatggactcg
tcatactgcaagacctttgtgtgtaacgtctgcgaggatccgttcaactccatcaaagag
ctcagtggacatatcacagagcatgctgctgactggcccttcaagtgtgaattctgtgtg
cagctgtttggtgacgccccggccctgctgactcaccggacaacactacatggagtcggc
aggatctttgtgtgctccgtttgttccaaggagtttgcgtttctctgtaacctccagcag
caccaaaaggatctgcatccaaacgagacgtgttcgcacacgaccgtagaaagcggcaag
cttaggccgcaaaactacacagatccatccagagccaaagaggagagcagtccctcatca
ccagcaccagagatgactgatgaagctgctccacacaatgactctgatttagcaaaagaa
gagcctgatcttaatggtaatcatgcagaggagggggcagaggaccccaatgaggagctg
tacactacaataaagatcatggcctcagaaggagcgaagcctaaaggcccagatgtgcgt
cttggcattaatcaacactaccccagttataaaccacccccttttccttatcatagccgt
tcccatgctgcatctgtggcctccgctaccaactttaccacccacaacataccacaaacg
ttcagcactgccattcgctgcaccaagtgtggcaacagttttgacaacatgcccgaactg
caccagcacatcttggcctgtgccaacgctagcgataagaagcgatacactcccaagaaa
aaccccatccccctcaagcaaatagtgaagagtccgaacggtgtggtgtcaccctcagca
gccactgcaggccagagtgctttccgtagaatgggtcagccaaagagacttaactttaat
caagatactggtaaaacaaaaatgagcgccctgagtaagaagaaaaaccagctggtccag
aaggcgatttcacagaagaataaagctgccacttttgcaaagaagggtaccgttaaagta
gaagaagagctgccctcaaacgtttgcccccactgcagtcgggagtttacttatcctgca
agtctcagtaaacacatggtgttcagctgtcccatgaagcctgttgttaaaaagggcaga
aaaggtcttgcagaggtgaaaaaagaggatagaaacacaaatcttaggaagaaggcttta
gactatgacatacagcagagagagacagagcaaaaacctctgggaaagaccagagctcgt
agctctggtgcatcagaccctgaaccctcccagccaagcaaaggaaaaacggctgctaca
ctgggccgactaaagaggcccgcctcgttcccagcaccagtttctgttagcaaaaaaact
aagaagggccatgttcagtctctacctcccaccccgtcagccctggacactcccagtgac
actgcacaacaacggcctgccatcagaatgcagcgtatgggcaaggaggcagcacccaag
agattagcagaggccaaatcaccgccatcacaacagctgaagaaagaggagcgcttctcc
cttcgaacgagggacagagtaggtggtccagtcaccaggagcttacaaatggccaacgcc
gctccttctgctgaggtgaaaactgaggatccaccaattcaagagccaaaagagactcag
gaggtgctgatgaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (63)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (101)   

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