KEGG   Larimichthys crocea (large yellow croaker): 104919514
Entry
104919514         CDS       T04659                                 
Symbol
agrn
Name
(RefSeq) agrin isoform X8
  KO
K06254  agrin
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04512  ECM-receptor interaction
lco04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104919514 (agrn)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104919514 (agrn)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lco00535]
    104919514 (agrn)
Proteoglycans [BR:lco00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   104919514 (agrn)
SSDB
Motif
Pfam: Laminin_G_1 Kazal_2 Laminin_G_2 Kazal_1 NtA Laminin_EGF CFAI_KAZAL SEA EGF Laminin_G_3 hEGF
Other DBs
NCBI-GeneID: 104919514
NCBI-ProteinID: XP_010729859
Position
XV:2262257..2508521
AA seq 2085 aa
MGSQRTLRPGRTALLLAGLLVALWQRCAASCPEKDLEDREEEANIVLTGTVDEIINMDPV
HNTYSCKVRVWRYLKGKSTVNREILLDGGNKVMIGGFGNPGICDNRVATGDTRIFFLNPA
PESMGPEHKNELMLNSSLMRITLRNLEDVEHCVEDKPPHFTPAQTPDGCRGMLCGFGAVC
ERDLTDPAKAECVCKRVECPSLVAPVCGSDSSTYTNECELEKAQCNTQRRIKVLRKGPCS
LKDPCTEVTCSYGSTCVQSSDGLSAKCMCPLGCEGKPEQTVCGSDGKDYRNECELHQHAC
KNQKNIRVQYQGPCDPCKDSENSVNTMCRVEALTRQPLLFGLPESCPPGSEPLCASDGQT
YPSECAMTSSGMQKGIKLRKIHAGRCRKMVECKEECLFNTVCLVEQLSAHCSCNPIECDG
TYKPVCGKDGHTYINDCVRRKTECLSKSLIPIKHPGPCDLSIPSPCLDKVCDHGAVCVVK
NNEPVCECPEACPQTPDPVCGSDGHSYGSPCEMRAMGCALQRTIHIQHKGPCDEACANCS
FGAICDSQSGLCVCASECVESHQPVCGSDGTTYNSECELHVRACIQQMDLRVVNQGECKT
CGNTVCAWGARCVQNKCECPQCVGEAAAYSPVCGSDGTTYKNECDLRMSSCMQKRRIDVA
KPGNCDEDCGSGGSGSGVESCEQDRCRTFGGSWDEDAEEDRCVCDFTCQSVPHNMVCGSD
GRNYNNECELKKARCEKQEHLLIQNQGPCAAISVTSTPELTAPKHCSLSVYGCCHDNMTV
ALGVGLAGCPSTCQCNVYGSYKGTCDPATGQCSCKPGVGGQKCDRCEPGFWNFRGIVTEN
ISGCTPCNCDPTGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSKMSMNGCDKGPEAPTS
CEELVCSYGASCIEENGQAHCECPSPDCDEKNKTKVCGSDGVTYADQCQLRTIACRQDKD
ITVQHFGQCTETISEPAERPTPNPLATTPSSTAAATITTAPFHPNKVWAIPPPRTETETT
EQPPTTTPYSTITHKRANHHHHPIHTQHQPWPTAAATTSSSLSSSLAPATAAASFEGSGS
GEPSGDDQTEEEEEPEEEAGSGIPPEASGAEEPVGPTVPSTTTPTAEDRSSCDNKEFGCC
PDGKTPASTPDGANCPSTMRFSGSLSLDQVEGQEIFYTPEMEDPKSELFGETARSIESAL
NELFRKSDVHKDFMSVRVRNLAPSNSILAYVEAHFKPDTRFTVEDIKGALLKQLKASKDT
SIVVKKPEDENIHFTNYGLSSTPFFTTTTTTTASVTTAAPTTTTTTRLPPTSPYITRRPP
GTTRRLYTSRRTTTTSAPVTTLLPTTTAAMTTAAVTTTTLPPATTIAHVRERFHHKRPCS
SHPCLHGGTCEDDGNDFICKCPAGRGGSVCEKVIKYFIPSFGGQSYLAFQTMSAYHTVRI
AMEFRASEVTGILLYNGQEGKKDFISLALVNGRVELRFNTGSGTGTLVSKVQINQGRWHQ
LVVTRNRRNAMLSVDNEPHIEGESPRGTDGLNLDTNLFIGGVTEDMKADVRERTAVATGL
VGCIRMLDVNNRVLNLQENGGDSLYGSGVGECGNNPCLPNPCKNGAACQVKEAEMFHCKC
SKGFWGPTCADVHDPCEPNRCHPSSQCQALPEGGYKCECPMGREGKHCEKVTERRGAYMP
LFHGDSYVELKGLHLYGHDLRQKLSMTVVLMANDSNGLIFYNGQKSDGKGDFISLSLNNG
ILEFRYDLGKGPAVIRSMEPIQLNVWNTINLERSNRKGEIMVNKKDPVRGEAPNLHVDLN
LKESLFVGGAPDYSRLARVAALTDGFTGTIQKIILMGTPILREEYTQRSSNVAMFQHHPC
SQEPCHNGGRCNPQLDTYECVCLSGFSGGHCQNTIYEKSAGETEAIAFDGRTFIEYHNAV
TKSEKALLVNKFELSIRTEATQGLVLWSGKGVERSDYIALAIVDGHVQMTYDLGSKPVVL
RSSVRVDTNRWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQLDTDGALWLGGLEELAV
SRRLPKAYSTGFVGCIKDVVVDGVELHLVEDALNSPKILHCSAAK
NT seq 6258 nt   +upstreamnt  +downstreamnt
atgggttcccaacgcacactccggcccggccggacagcgctgcttctagcggggctgctc
gtggctctgtggcagcgttgcgccgcaagttgcccggagaaagacttggaggacagagaa
gaagaggccaacatagttttgaccggcaccgtggacgaaataattaacatggaccctgtg
cacaacacctactcctgcaaggtcagggtttggcgctacttgaaagggaagtccaccgtc
aaccgtgaaattctcctggatggtggcaacaaggtgatgatcggtggctttggcaaccct
gggatctgcgacaatcgggtagccacgggcgacactcgcatattcttcctcaaccctgcc
ccagagtccatgggtccagaacacaagaacgaacttatgctcaactcaagtctgatgagg
attaccctgcgcaacctggaggacgtggagcactgcgtggaagacaaacctcctcacttc
acaccggctcagactcctgatggctgcagagggatgctgtgtggcttcggcgccgtatgc
gaacgtgacctgacggacccggccaaggccgagtgtgtctgcaagagagtggaatgtcca
tccttggtggcgcctgtttgcggctcagattcgtccacctacaccaacgagtgcgagctg
gagaaagcccagtgcaacacacagcgacgtatcaaggtgctgcgcaagggaccctgctct
ctgaaggatccctgcaccgaggtgacctgcagctatggaagcacctgtgtccagtcgtca
gacggcttgtcagccaaatgcatgtgccccctcggctgtgagggcaaacccgagcagaca
gtatgcggcagtgatggaaaggactaccgcaacgagtgcgagcttcatcagcacgcctgc
aagaaccagaagaacatacgagtgcaataccaagggccctgcgacccatgtaaagacagt
gaaaacagtgtgaacacgatgtgccgggtggaggctctcacccgtcagcccctcctcttt
ggcctgccggagtcgtgtccaccaggtagcgaacctctgtgtgccagcgacggccaaacc
taccccagcgagtgcgccatgacatcatctggcatgcagaaaggcatcaagctcaggaag
atccacgcaggccgatgcagaaagatggtcgaatgcaaggaggagtgtctcttcaacacc
gtgtgtctggtggaacagctgagcgcccactgttcctgcaatcccatcgagtgtgacggc
acctacaagcccgtgtgtggcaaggacggccacacctacatcaacgactgtgtccgacgc
aagacggagtgcctgagcaagtccctcatccccatcaagcacccagggccctgtgatctc
agcataccgagcccctgcttggataaggtgtgcgatcatggggcggtgtgcgtggtcaag
aacaacgagccagtgtgcgagtgtcctgaggcttgcccacaaacgcccgacccggtgtgc
ggctctgacggccacagctacggcagtccctgtgaaatgcgagcgatgggttgcgccctg
cagaggaccattcacatccaacacaaaggaccctgtgatgaggcctgtgccaactgctct
ttcggggcaatctgcgattcccagagtgggctgtgtgtgtgcgcatcggagtgtgtggag
tcccaccagcctgtgtgcggcagcgacggcaccacctacaacagcgagtgtgagctgcac
gtgcgggcctgcatacaacagatggacctccgagtggtcaaccagggagaatgcaaaaca
tgcggcaacactgtttgtgcctggggtgcccggtgtgtccagaataagtgtgagtgcccg
cagtgcgtgggtgaggccgcggcctactctccggtgtgtggcagcgatggcaccacctac
aaaaacgagtgtgatctccgcatgtcctcctgcatgcagaagaggagaattgatgtcgcg
aagcctggcaactgtgatgaagactgtggctcgggaggatcaggctcaggcgtggagagc
tgtgaacaggaccgatgtcgcacgtttggaggctcgtgggacgaggatgcagaggaggac
cgttgtgtctgtgacttcacctgccagagtgtgccccacaacatggtttgtggctcagat
ggaagaaactacaacaatgagtgtgagctgaagaaggccaggtgtgagaaacaagagcac
ttgttgattcagaatcagggaccctgtgcagcgatttcagtcacatccacgcctgagctg
acagcacccaagcactgcagtctgtctgtgtacggctgctgccacgacaacatgacggtc
gccttaggagttggactggctggatgtcccagtacctgtcagtgtaatgtctacggctcc
tacaaaggaacatgtgatccagccaccggccagtgctcctgtaagcctggagtcggggga
cagaagtgtgaccgctgtgagccgggcttctggaacttccgtggcatcgtgaccgagaac
ataagcggctgcacgccgtgtaactgcgaccccacgggctcggtccgggatgattgcgag
cagatgtcgggtctgtgttcctgcaagacaggagtgaagggcatgaaatgcaacgtgtgt
ccagatggaagcaagatgagcatgaatggctgcgacaaaggtcctgaggcaccaacttcc
tgtgaagagttagtgtgcagttatggagcctcttgcattgaggagaacggccaagcccac
tgcgagtgcccatcacctgactgcgatgagaaaaacaagaccaaggtgtgcggctcagat
ggggtgacctatgccgaccagtgccagctgaggaccatagcctgtaggcaggacaaggac
atcacagtgcaacactttggacagtgcacagaaaccatctctgagccggcagaaagaccc
acccccaaccccctagccaccaccccaagctcaaccgctgccgccaccatcaccactgcc
cccttccaccctaacaaggtgtgggccatcccgcctccaaggacagagacagagaccaca
gagcagcccccgaccaccaccccctattccaccatcacccacaagcgagcaaaccaccac
caccaccccatccacactcagcatcagccgtggcctaccgccgctgccaccacctcctcc
tctttgagcagcagcctcgcccccgccaccgctgctgcctccttcgagggctcgggcagt
ggggagccaagcggggacgaccagaccgaagaagaggaggagccagaagaggaagcgggt
agtggcatcccaccggaggccagtggggcagaggagcctgtcggtcccacggtgccaagc
accaccacacccacagccgaggacaggtcatcctgtgacaacaaggagttcggctgctgc
cccgacggcaagacaccagcaagtactccagatggcgccaactgcccctccaccatgagg
ttcagcggttccctgtccttggaccaggtggaaggccaggagatcttctacacccccgag
atggaggaccccaagtcggagctgtttggagagacagcccgcagcatagagagtgctctc
aacgagttgttcaggaagtcggacgttcacaaagattttatgagcgtgcgtgtccgtaac
ctggcaccaagcaactctatcctggcctatgtggaggcccacttcaaaccagatacaagg
ttcacagtggaggacattaaaggagccctgctgaaacaactgaaggcatccaaagacacc
agcatcgtcgtgaagaagccggaggatgagaatattcacttcaccaattatggcctctcc
tccaccccgttcttcaccaccactaccaccaccacagcatcagtcaccacagctgctccc
accacaaccaccaccaccaggcttccaccaacctccccctacatcacccgtcgcccacct
ggcaccacccgcaggctttacaccagcagacgaaccaccacaacttcagcaccggtcacc
acgctgctacccaccaccacagcagccatgacaacagcagccgtgaccacgaccacgttg
cctccagccaccaccatagcccacgtgagggaaaggtttcaccacaagaggccctgcagc
tcccacccttgcctccacgggggaacctgcgaggacgacggtaacgacttcatctgcaag
tgccccgccgggcgaggaggctccgtgtgtgagaaggtgatcaagtacttcattccgtca
tttggaggccagtcgtacttggctttccaaaccatgagcgcttatcacacggtccgcatc
gccatggagttcagggcttccgaggtaaccggcatcctgctctacaacggccaagagggc
aagaaggacttcatctctctggctctggtcaacggcagggtggagctcaggttcaacaca
ggttcgggcacaggcaccttggtcagcaaagtacaaatcaatcagggccgctggcatcag
ctggtggtgacacgcaaccgccgcaacgccatgctcagcgtggacaacgagccgcacatc
gagggcgagagtccgcgcggcacagacggcctcaacctcgacaccaacctgttcattgga
ggagtgacagaggacatgaaggctgacgtaagggaaaggacagcggtggccacaggtctg
gtgggctgcatccgcatgctggacgtcaacaaccgagtgctcaacctgcaggagaacggc
ggtgacagtctgtacggcagcggcgttggtgaatgtggcaacaacccctgcctgccaaat
ccctgtaagaacggcgctgcatgccaggtcaaggaggcagagatgttccactgcaaatgc
agcaaaggattctggggaccaacttgcgctgacgtccatgatccatgcgagcccaacagg
tgccatccatcctcccagtgccaggcgctgcccgagggaggctacaaatgcgagtgtcca
atgggacgcgaagggaaacactgcgagaaagtgactgagaggagaggcgcttacatgcca
ctattccatggagactcctacgtggagctgaaggggctccatctctacgggcacgacctg
cgtcaaaagctcagcatgacagtggtcctcatggccaatgactccaatggtctgatcttc
tacaacggccaaaaatcggacggtaaaggagacttcatctctctgtccctcaataacggg
atcctggagttccgctacgacctggggaagggacctgctgtcatcaggagtatggaacca
atccagctgaacgtgtggaacaccatcaacctggagcggtccaaccgcaaaggagagatc
atggtgaacaagaaggaccctgtccgtggggaggcaccgaacctgcacgtagatcttaac
ctgaaagagtctctttttgttggtggagctcccgactacagccgactagcaagagtcgct
gcacttacagacggcttcacaggaacaatccaaaagatcattctcatgggcaccccaatc
ctcagagaggagtacacccagcgctccagcaacgtagccatgttccagcatcacccgtgt
tcccaggaaccctgccacaacggcggccgctgcaacccccagctggacacctatgagtgt
gtttgccttagtggtttctcagggggacactgtcagaacaccatctacgagaagtctgcc
ggagagacagaggccatcgcctttgacgggcggaccttcatcgagtaccacaacgctgtt
acaaagagtgagaaggctctgctggtgaacaaattcgagctgagcatccggacggaagca
acccagggcctggtgctgtggagcgggaagggcgtggagcgctctgactacatcgccctg
gccattgttgacggacatgtccagatgacatacgacttgggctccaaacccgtggtgctg
cgttcctctgtgcgtgtcgacaccaaccgctggatacgcatcaaggccagcagagcactt
agagacggctctctacaggttggcaatgaggcagcggtaacagggtcatcgcctttggca
gcaacacagctggacacagacggagcgctctggttgggtggtctggaggagctggcggtg
tcccgtcggttgcccaaggcctacagcaccggctttgttggctgtatcaaggacgtggtg
gtggacggcgtggagctccaccttgtggaggacgccttaaacagccccaaaatactacac
tgttccgccgccaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (128)   
   KEGG ORTHOLOGY (1)   
   RefGene (124)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (11)   
   Pfam (11)   
All databases (162)   

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