KEGG T04659: 104923496

Larimichthys crocea (large yellow croaker): 104923496

Entry

104923496         CDS       T04659

Symbol

fxr1

Name

(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1

K15516

fragile X mental retardation protein

Organism

lco Larimichthys crocea (large yellow croaker)

Brite

KEGG Orthology (KO) [BR:lco00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104923496 (fxr1)
Messenger RNA biogenesis [BR:lco03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104923496 (fxr1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     104923496 (fxr1)
   mRNA cycle factors
    Stress granule specific factors
     104923496 (fxr1)

SSDB

Motif

Pfam:

FXMRP1_C_core FXR_C1 KH_9 Tudor_FRX1 KH_1 Agenet FXR_C3 Tudor_2

Other DBs

NCBI-GeneID:

104923496

NCBI-ProteinID:

XP_010734905

Position

XVII:3168217..3179877

AA seq 706 aa
MEELVVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFNDVRMLPPADGKKDIG
EGEEVEILSRANDQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNPNKA
ITKNSFHKCTVPVPQDLQEACQNENAHKEFKKAVGAFRISYCPETSQLVIVSMNETTVKR
VSLLSDMHLRSIRTKLLLMSRNHEATKHLESSRQLVSSFQEEFMVRLDLMGLAIGSHGSN
IQQARKVAGVTAIELDEETGTFRIYGESAEAVKKARGYLEFLEDSVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKQPRQELTQGMVPFTFVGTKESIGNVQVLLEYHISY
LNEVEQLRLERMQIDEQLRQITQGHRPADRERGERGERGERGERGERGGGYNTDGSANAS
SSSLHVTRSYNGRGRGRRGHSYSTGYGTNSEQSNASETDSERKDELSDWSLAGEDHDRER
ERERGPRPLRDGRRRPGPGRGRGGSGGRGRGGRGGYHNSSAGPRDHEDNHAYGASEVNTE
TDQTADTDASESNVPANRRRRSRRRRTDEDATLMDGMSESDNASMSENGIDDPEAKPQRR
NRSRRRRIRLPEERQPVTVADYISRAESQSRQMTKDVKKSKDVGQVDAIAEHSPPSAPAT
TNGSKNNLADGDGSNAPRAPRSSTERPAKVSYQGDSNLQPVVNGLS

NT seq 2121 nt +upstreamnt +downstreamnt
atggaagaactggtggtggaggtccgtggctccaacggggcttattacaagggctttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagaacgc
caggtgcccttcaatgatgtcaggatgctaccacccgcggacggcaagaaggacattgga
gagggcgaggaggtggagatcttgtccagagccaatgatcaggagccttgtggttggtgg
ctggctaaagtccgcatgatgaagggggatttctatgtgatagagtatgcagcctgcgac
gctacttacaatgagatagtgacctttgagcgtctgcgtccagtaaaccctaacaaggcc
atcacgaagaactccttccataagtgcactgtccctgttcctcaggatcttcaagaagcg
tgccagaatgagaacgcgcacaaggagtttaagaaagctgttggagcctttcgcatttca
tactgccctgagacaagccaactagtgatcgtgtccatgaatgagacgacagtgaagcgc
gtgtctttgctgagtgacatgcacttgcgcagcattaggaccaaactgctgctaatgtca
cgcaaccacgaggccacaaagcacctggagagctccaggcagctggtgtcatctttccag
gaggaatttatggtgagactggacctgatgggcctggctatcggcagtcatggcagcaac
atccagcaagcacggaaagttgcaggcgtcactgccattgagctggatgaggagactggc
accttcaggatttatggagagtcagcagaggcagtgaagaaggccaggggctacctagag
tttctggaggactctgtccaggttcccaggaatcttgttggcaaagtgattggtaagaac
ggtaaggtcatccaagagattgtggacaagtctggtgtggtgagggtcaggatagaggga
gacaatgacaacaagcagcctcgacaggaattgacacagggaatggtcccattcaccttt
gttggtactaaagagagtattggaaatgtccaggtcttgctggagtaccacatctcttac
ctcaatgaggttgagcagcttcgtctggagaggatgcagattgacgaacagttgcgtcag
attacccagggtcaccgaccagctgacagagagagaggagagagaggagagagaggggag
agaggagagagaggggaaagaggaggtggatataatacagatggtagtgctaatgcctcc
tcgtcttctttacacgtcactcgttcctacaacggacgaggacgtggacgcagaggccac
agctacagcaccggatatggcaccaactcagagcagtccaacgcctctgagacagactca
gagcgcaaagatgagctcagtgactggtccctcgcaggagaggaccacgacagggagagg
gagagggagaggggacctcgaccattaagagatggtcgcaggaggcctggaccgggcaga
ggccgtggagggtctggaggaaggggaagaggaggacgaggaggataccacaacagctct
gcaggtcctcgggatcatgaggacaaccatgcctatggagcctctgaggtaaacacagag
acagaccagacagctgatacagatgctagtgagtccaacgtgcctgcaaaccgccgcaga
agatctcgacgacgcaggacagacgaggacgccacactgatggatggcatgagcgagtcg
gacaacgcctcaatgagcgaaaatggaatagatgaccccgaagctaaacctcagcgtcgt
aaccgtagtcgacgtcgccgcatccgcctgcctgaggaaaggcagccagtgaccgtggct
gactacatatccagggctgaatctcagagcagacagatgaccaaggacgtcaagaaaagc
aaggacgtgggtcaggtggatgccatcgccgagcacagcccaccatctgctccagcaacc
accaatggttccaaaaacaatcttgccgatggtgatggcagcaatgcccctagagctccc
aggtcttccactgagaggcctgccaaagtctcctaccagggggactctaacctgcaacct
gttgttaacggactctcttag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (45)   

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