KEGG   Larimichthys crocea (large yellow croaker): 104923636
Entry
104923636         CDS       T04659                                 
Symbol
tpm4
Name
(RefSeq) tropomyosin alpha-4 chain isoform X4
  KO
K10375  tropomyosin 4
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04260  Cardiac muscle contraction
lco04261  Adrenergic signaling in cardiomyocytes
lco04814  Motor proteins
lco04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    104923636 (tpm4)
   04820 Cytoskeleton in muscle cells
    104923636 (tpm4)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    104923636 (tpm4)
   04261 Adrenergic signaling in cardiomyocytes
    104923636 (tpm4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lco04812]
    104923636 (tpm4)
Cytoskeleton proteins [BR:lco04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     104923636 (tpm4)
SSDB
Motif
Pfam: Tropomyosin Laminin_II TMF_DNA_bd HR1 DUF3450 DUF745 BST2 XhlA Fez1 CCDC144C DUF1664 Nuf2_DHR10-like DUF16 Lebercilin CENP-F_leu_zip ATG16 FPP
Other DBs
NCBI-GeneID: 104923636
NCBI-ProteinID: XP_010735092
Position
XVII:19380982..19403696
AA seq 248 aa
MAGMNSLDAVKRKIQCLQQQADDAEDRAQVLQRQLDSERELREKAEGDVAALNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE
EADRKYEEVARKLVILEGELERAEERAEVSECKASDLEEELKNVTNNLKSLEAQSEKYSE
KEDKYEEEIKVLTDKLKEAETRAEFAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDH
ALNDMTSL
NT seq 747 nt   +upstreamnt  +downstreamnt
atggcaggtatgaactctctggatgctgtgaagaggaagattcagtgtttgcagcagcag
gccgacgacgcagaggatcgggctcaggtcctacagagacagctggacagtgaacgggag
ctccgagagaaagcggagggtgatgtagcagctctgaaccgtaggatccagctggtggag
gaggagttggaccgagcccaggagaggctggccacagcgctgcagaaactggaggaggct
gagaaggccgcagatgagagcgagagagggatgaaggtgattgagaacagagcgatgaag
gatgaagagaagatggagattcaggagatgcagctgaaggaggccaaacacatcgcagag
gaggctgaccgcaaatacgaggaggtggcccgtaagctggtgatcctagagggagagctg
gagagagccgaagagagggccgaggtctcagaatgtaaagccagcgacctggaggaggag
ctgaaaaatgtgaccaacaacctgaagtccttagaagcccagtctgagaagtactcagaa
aaagaagacaagtacgaggaggagatcaaagttctgactgacaaactgaaggaggctgaa
acccgtgcagagtttgcagagaggacagtggccaaactggaaaagtccattgatgacctg
gaagatgaactgtatgctcagaagctgaagtacaaggccattagtgaggagctggaccat
gccctcaatgacatgacatctttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (17)   
   Pfam (17)   
All databases (46)   

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