KEGG   Larimichthys crocea (large yellow croaker): 104924826
Entry
104924826         CDS       T04659                                 
Symbol
npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
  KO
K09098  neuronal PAS domain-containing protein 1/3
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lco03000]
    104924826 (npas3)
Transcription factors [BR:lco03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    104924826 (npas3)
SSDB
Motif
Pfam: PAS_3 PAS PAS_11 PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 104924826
NCBI-ProteinID: XP_019118760
Position
V:588407..896197
AA seq 1070 aa
MIRIFPDFSVQVTASAGGGPGAGSGGGGGGGGGGGGMVTGPSVGRVPVPGATNGTPQSVQ
GITAYQQSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGK
ENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTS
VKAIGAQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQ
VELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEP
VESSSPSLLAPDNTLERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSV
PNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIIYCENRINDYMDLTPVDIVGK
RCYQFIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEK
NVIWVNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSESESKENSDNENAKSEGKPG
HQSERSEDPETDSKRQQQPSQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEE
QEEATGGGGGGGGGGGGRLARLAGLGGLGGLGTISGLGNLGGLHIKVEHYGEGEEVQLHN
SQSSSSEEEEEEEDDDEEEDGGVQECDSANAGGKLQKRRKRRKVQKWDGSRSRRVRLSST
TPSPVAMGDTTPLVDPSQATSASSSHLLASSGSPNSAGATSSVLKIKTEMAEPINFDNDS
SIWNYPPNREISRNESPYSMTSKPAAPGSHETFPSPQGGSLQVAIPDSVLTPPGTEGGAG
GVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSS
SSSSSSSSSTLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTNTTAPRVYTTGTIRYAP
ADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPA
ATGANGTLGGQMPSAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgatcaggatcttcccggatttcagcgtccaggtgacggcttcggcaggcggtggaccc
ggggctggaagtggtggtggaggaggaggcggaggaggaggcggcgggatggtgaccgga
ccctcggtgggtcgggtgccggtccccggagccacgaacgggaccccgcagagcgtgcag
ggaatcaccgcctaccagcaaagtgacccctactgggagcggccggctaatgcaggcagc
tgctccgccgcccggcccaagacccttcacctggccggccagcagcatacctcctcacca
tggttgcaggctctgaggaaggagaagtcacgagacgcggcacgatcgcggcggggaaag
gagaactttgagttttatgagctggcaaagatgctgccactgccgggcgccatcaccagc
cagcttgacaaggcctccatcatccggctcaccatcagctacctgaagatgagggatttc
gccaaccagggagacccgccatggaacctgcgcatggagggaccgccgcccaacacctcc
gtcaaagctatcggtgcccagcgaaggaggagtcccagcgccgtcgcctcggagatcttc
gagcctcacctgggcagccacattttacagtctctggacgggtttgtatttgcactaaac
aaggagggacgcttcctctacatctccgagactgtctccatctacctgggattgtcacag
gtggagctgactggcagcagtgtcttcgactacatccaccctggcgatcacgtggagatg
gcggagcagctcggcatgaaacttcctccgggccggggaatgtctctgtcccagggagcc
gtcaacgaagacggggcgtcctcggcttcgtcatcgtcgcactccgagacgcccgaacca
gtggagtccagcagtccgagtcttctggctcctgacaacactctggaacgatccttcttc
gtcaggatgaagtcgacgctcacaaagagaggagtgcacatcaagtcctcaggatacaag
gtgatccacgtcacggggcgtctacgcatcaggatggctttgacgcacagccgctctgtg
cccaatcagatcatggggatggtggtggtggctcacgccctcccgccgcccactatcaat
gaggttcgcattgactgtcaaatgttcgtcacccgagtcaacatggatctcaagatcatc
tactgcgagaacaggatcaatgactacatggacctgactccggtggacattgtggggaag
aggtgctaccagttcattcatgctgaagacgtggagggaatcaggcagtgtcacctggac
ttgatgaacaagggtcagtgtgtgacaaagtactaccggtggatccagaagaacggtggt
tacatctggatccagtccagtgccaccatcgccatcaacgccaagaacgccaacgagaaa
aacgtcatctgggtcaactatgtcctcagtaatccagagtacaaagacacgcccatggac
atcgcccagctgcccaacctgcctgagaaaacctctgagtcttccgaaacctccgactct
gagtctgagtccaaagaaaactctgacaatgagaacgccaagtctgaggggaagccaggc
caccaatcagaacgcagtgaggacccggagacagacagtaagcgtcagcagcagcccagc
caaccacactgctcctcagaacaggagatgaagcgtcaggaagaaggagacagctcgagt
aacccagagagccaggacagtgacgatagcctggaaccttcagatggagagggggaggag
caggaggaggcaaccgggggaggaggtggaggaggaggtggaggaggaggaaggctggcg
aggttagcaggactgggagggttagggggactgggcactatcagtggactgggtaatctt
ggtggtcttcatattaaggtagagcactacggagaaggtgaagaagtacagttgcacaac
tctcaatcttcttcatcagaggaggaggaagaagaggaggatgacgatgaggaagaggat
ggaggcgtgcaagaatgtgacagtgccaatgccggaggcaaactccagaagagacggaag
aggaggaaagtgcagaaatgggacggatctcgaagtaggagggtccgtctctcctcaacc
acccccagccctgttgccatgggagataccacaccgctggttgacccctcccaggccaca
tctgccagctcctcccacctcctcgcctcctccggctcgccaaacagcgcaggtgcaaca
tcctctgtcctgaaaatcaagacagagatggcagaaccgatcaacttcgacaacgacagc
agcatctggaactacccacccaacagggagatttcccgaaacgagtccccgtacagcatg
acctccaagccggctgctccagggagccatgagacctttccctcaccgcagggaggctct
ctccaagtagccattcccgactccgtccttactcctcctggaacagagggaggagcagga
ggagtgaggaagcctccttacaatggaagctcggccccgtcctccgcttccagtgctgcg
agtttagctccgccctccagcgcctcctctgccgaccccctatcccctcctctctctgcc
tccccaagggacaagcaacaaggcacccccaccacctcttcttcctcctcttcctcatcc
tcctcgtcctcatcaagctcttcctctacactgctgtactctggcgatcttgaggcactt
cagcgtctgcaggccggtaatgtggtgctcccgttggtccatcgggtcacgggaactttg
gcctccaccaacacgacggctccacgggtctacaccacaggaaccatcaggtatgcaccg
gcggacgtcaccctggctatggcgcaaggcaacctcctccccaatgctgccatgaacttt
gtagacagctcggggttcggcctggaccctaagacgcccatggagatgctctaccaccac
gtccacaggctcaacatgtcggcagcagcagccgctggcccgtttgttggatctcctgcc
gccacaggtgcgaatggcaccctgggaggccagatgccgtccgcagccaatgttttcacc
acagcagagggacttttctcgacactaccgttccctgtgtacagcaacgggatccacacc
acgcagacgactctggagaggaaggaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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