KEGG   Larimichthys crocea (large yellow croaker): 104935794
Entry
104935794         CDS       T04659                                 
Symbol
sepsecs
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase
  KO
K03341  O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:2.9.1.2]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco00450  Selenocompound metabolism
lco00970  Aminoacyl-tRNA biosynthesis
lco01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lco00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    104935794 (sepsecs)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    104935794 (sepsecs)
Enzymes [BR:lco01000]
 2. Transferases
  2.9  Transferring selenium-containing groups
   2.9.1  Selenotransferases
    2.9.1.2  O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
     104935794 (sepsecs)
SSDB
Motif
Pfam: SepSecS Beta_elim_lyase Aminotran_1_2 Pyridoxal_deC
Other DBs
NCBI-GeneID: 104935794
NCBI-ProteinID: XP_019134991
Position
III:7562339..7573135
AA seq 485 aa
MNSENFSLSEKIVSPAYVRQGSQARRSHEQLIRHLLEQGKCPEEGWSESTIELFLNELAV
MDSNNFLSNCGVGEREGRVASSLVARRHYRLIHGIGRSGDIAAVQPKAAGSSLLNKLTNS
VVLDILKLSGVQKVASCFVVPMATGMSLTLCFLTLRHRRPKARYIIWPRIDQKSCFKAMI
TAGFEPVVVENVLEGDELRTDLEAVERKIEELGAENILCVHSTTSCFAPRVPDRLEELAT
VCAKHNLPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFDE
SFIQEISKMYPGRASASPSLDVLITLLTLGASGYKKLLSERKEIYSFLAQELKTLASAHG
ERLLHTPHNPISLAMSLDGLQAKSNKAVTHLGSMLFTRQVSGARVIPLGKEQTVSGHTFR
GFMSHSEAYPCPYLNAASAVGITREDVTLCIKRLDKCLKTLKKEGNAAKSSSPVPPPCQE
DTGEE
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgaacagtgaaaacttcagcctgagtgagaagatagtgtcacccgcctacgttcgtcag
gggagccaggcgcgccgaagccatgagcagctcatcagacacttactggagcagggtaag
tgtccggaggagggatggagtgagagcaccatagagctcttcttgaatgagctggctgtg
atggacagcaataatttcctcagcaactgcggtgtgggagagagggaaggccgggtggca
tccagccttgtggcgagacgacattacaggttgatccatggcataggtcggtcaggtgac
atcgctgctgttcagcccaaagcggcaggatccagtctgcttaacaagctgaccaattca
gttgtgctggacattttaaagctctcaggtgtccagaaggtggcgagctgctttgttgtt
cccatggcgacagggatgagcttgacactgtgcttcctgaccctccgtcatcggcgaccc
aaggctcgctacatcatttggcctcgtatcgaccagaagtcctgtttcaaagccatgatc
acagcaggctttgaaccggtggtggtggagaatgttcttgagggcgacgagttgcggaca
gatttggaagcagttgagcgtaagatcgaggagctcggagctgaaaacatcctgtgtgtt
cattcaacaacatcctgcttcgccccacgggtccctgacaggcttgaggagctggccact
gtgtgcgctaaacataaccttccccacatagttaacaacgcgtacggagtacagtcgtcc
aaatgcatgcaccttatacaacagggtgctcgtgtaggaagaatcgatgccttcgtacag
agcttggacaagaactttatggttccagtaggtggcgccataatcgcaggttttgatgag
tccttcatacaggagatcagcaagatgtacccgggtcgagcatcggcttcgccttccctt
gacgtcctcattacccttctcaccctgggagccagcggctacaagaaactcctgtcagaa
aggaaggagatttattcgttcctggctcaggagctgaagactctggcctctgcacacggg
gagagattgctccacaccccacataaccccatttcactggccatgtctctggatggtctc
caggccaagagcaacaaggcagtgactcacctcggctccatgttgttcacccggcaagtg
tcaggagccagggtcataccgctgggaaaggagcagaccgtaagcggacacacgttccgc
ggctttatgtcgcactcggaggcatacccatgcccttacctcaacgctgcctcagccgtg
ggcatcacgcgcgaagacgtgacactgtgcatcaaaaggctcgacaagtgcctgaagacc
ctgaagaaggagggaaacgcggcgaaaagtagttccccggtacctccgccatgccaggag
gacactggtgaagagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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