KEGG   Lucilia cuprina (Australian sheep blowfly): 111690515
Entry
111690515         CDS       T06013                                 
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
lcq  Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:lcq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcq03041]
    111690515
   03009 Ribosome biogenesis [BR:lcq03009]
    111690515
Enzymes [BR:lcq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111690515
Spliceosome [BR:lcq03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    111690515
Ribosome biogenesis [BR:lcq03009]
 Eukaryotic type
  90S particles
   Helicases
    111690515
  Pre-60S particles
    111690515
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 AAA_22 Helicase_C_2
Other DBs
NCBI-GeneID: 111690515
NCBI-ProteinID: XP_023308778
EnsemblRapid: LOC111690515
Position
4:3312739..3315677
AA seq 669 aa
MSIREKLLMKKIKKREKMKKELAEKKGKQQKQQPPTKQRVKNAAPMEEDELDDDFQEMPQ
QIVKNGKPQKKKKQQQMQVVNSDSESDDEEEEMDDSDEEDQEEQSGDEEEDEEEDGSELS
DSEDEEPEHNVKQSNKEKQKKTNNAKEEQAFEELDPKAAAKALEQRDNSDRSFASLKGIV
SDATLKAIEEMGFTEMTEIQAKSLPPLLQGRDLVGAAQTGSGKTLSFLIPAVELIYKLRF
MPRNGTGVIIISPTRELSMQTFGVLKELMNHHNHTYGLVMGGSNRQVESEKLSRGVNILV
ATPGRLLDHLQNSPDFLYKNLQCLVIDEVDRILEIGFEEELKQIVNLLPKRRQTMLFSAT
QTEKIDALSKLALKKEPIYVGVDDNKDTATVSGLEQGYIVCPSEKRLLVLFTFLKKNRKK
KVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAAEGILLCTDVAA
RGLDIPQVDWIVQFDPPDDPKEYIHRVGRTARGTGSSGHALLMLRPEELGFLRYLKAAKV
PLNEFEFSWNKIADIQLQLEKLISKNYFLNQSAKEAFKSYVRAYDSHQLKTIFNVNTLDL
QAVAKSFGFLVPPVVDLKVGAAKRQRPEKRVGGGGFGYYKNMNEEKSKQRVFKQVSREQL
QKKGKNFMR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtctattcgcgaaaagctattaatgaaaaaaataaagaaacgcgagaaaatgaagaaa
gaattggctgagaaaaaaggcaagcaacaaaaacagcagccaccaacaaaacaacgtgtt
aaaaatgcagctcccatggaagaggatgaactggacgatgattttcaagaaatgccccaa
caaattgttaaaaatggaaagcctcaaaagaaaaagaagcaacaacaaatgcaagtagta
aattcggattcagaaagtgatgatgaagaagaagaaatggatgatagtgatgaggaagac
caagaagaacaaagtggtgatgaagaagaagatgaagaggaagatggcagtgaattgtcc
gatagtgaggatgaggaaccagaacataatgtcaagcagagtaataaggaaaaacaaaag
aaaactaacaatgctaaagaagaacaggctttcgaagaacttgatcctaaagctgctgcc
aaagccttggaacaacgtgataattccgatcgctcttttgcctcccttaagggtattgtt
tctgatgctaccctcaaggctatagaagaaatgggtttcactgaaatgactgaaattcaa
gccaaatcattgcctcctttgttacaaggtcgtgatttggtgggtgctgctcaaactggt
tcaggcaaaactctatcctttttgattccagccgttgaattgatttacaaactaagattt
atgccccgtaatggtaccggtgtcataattatctcccccactagagaattgtctatgcaa
acctttggtgttcttaaagaattaatgaatcatcacaatcatacttatggtttggtaatg
ggtggttctaatcgtcaagttgaaagtgaaaaattaagtagaggtgtaaatattttggtg
gctacaccaggacgtttattagatcatttacaaaattcacccgactttttgtacaagaat
ttgcaatgtttggtcatcgatgaagtcgatcgtatattggaaattggttttgaggaagag
cttaaacaaattgtcaatttgttgcccaaacgccgtcaaactatgttgttttcggccaca
caaactgaaaaaattgatgccttgtccaagttggctttaaaaaaagaacccatttatgtg
ggtgttgatgacaacaaggatactgccactgttagtggtttagaacaaggttatatagtt
tgtccctccgagaaacgtttattggtgctgttcactttccttaagaaaaatcgcaagaag
aaggttatggttttcttttcatcctgtatgtctgtaaaatatcatcatgaattatttaat
tatatagatttgcctgttacctccatacacggtaaacaaaaacaaacaaaacgtacaaca
actttcttccaattctgtaatgctgccgagggtattttactgtgtactgatgtggctgct
cgtggtttggacattcctcaagtcgattggattgtgcaatttgatcctccagatgatcct
aaagaatacattcatcgtgtaggtcgaactgcacgtggtactggtagttctggtcatgct
ttgttaatgttacgtcccgaggaacttggtttcttgcgttatttgaaggctgccaaggta
ccattgaatgaatttgaattttcatggaacaaaatcgctgatattcaattacaactcgaa
aaacttatttcgaaaaactacttccttaatcaatcagccaaagaggctttcaaatcatac
gttcgtgcttatgattcccatcaattgaagaccatatttaatgtcaacaccttggacttg
caggctgttgcgaagagctttggttttctggtgccaccagtggttgatcttaaagttggt
gctgccaaacgacaaaggcctgaaaaacgtgttggaggtggtggtttcggttattataaa
aacatgaacgaagagaaaagcaaacaacgtgtgtttaaacaagttagtcgtgagcaattg
caaaaaaaaggtaaaaattttatgcgatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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