KEGG   Leishmania donovani: LDBPK_350370
Entry
LDBPK_350370      CDS       T02289                                 
Name
(RefSeq) ATP-dependent DEAD-box RNA helicase, putative
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
ldo  Leishmania donovani
Pathway
ldo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ldo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LDBPK_350370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ldo03019]
    LDBPK_350370
   03036 Chromosome and associated proteins [BR:ldo03036]
    LDBPK_350370
Enzymes [BR:ldo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LDBPK_350370
Messenger RNA biogenesis [BR:ldo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     LDBPK_350370
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     LDBPK_350370
Chromosome and associated proteins [BR:ldo03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    LDBPK_350370
SSDB
Motif
Pfam: DEAD Helicase_C AAA_19 AAA_22
Other DBs
NCBI-GeneID: 13387508
NCBI-ProteinID: XP_003864630
UniProt: A0A3Q8IEU7
Position
35:93344..94561
AA seq 405 aa
MSDSNWKAQLNAPQKSTRKKTEDVESRRNVNFEEYALRRELQMGIFEKGFEKPSPVQEEA
IPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRESYVQALLMVPTRELALQTAQVTKE
LGKHIPGLEVMVTTGGTTLRDDILRLTSKVHILVATPGRVLDLASKKAVDLSHCHILVLD
EADKLLSQEFMEIIDDLYTYLPSQLQSMLFSATFPVTVKTFAERHLHNPYEINLMDELTL
KGVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHA
RMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSG
RFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPIPAEIDPELYAA
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtccgactcgaactggaaggctcagctgaacgcgccgcagaagagcacgcggaaaaag
acggaggatgtggagtctcgccgtaacgtcaacttcgaggagtacgccctgcgccgcgag
ctgcagatgggcatcttcgagaagggcttcgagaagccaagccctgtgcaggaggaagcc
attcctgtcgcgcttcagggcaaggacgtgcttgcccgtgccaagaacggtactggcaag
acagcctcattcgtgatcccagtgctcgagaaggtcgacacccgcgagtcgtatgtccag
gctctcctgatggtgcccacccgtgagctggccctgcagacagcgcaggtgacaaaggag
ctgggcaagcacatccccggcctggaggtgatggtgaccaccggtggtacgacgctgcgc
gatgatattcttcgcctgacaagcaaggtgcacattctggtggcgactcccggccgtgtg
cttgacctggcgagcaagaaggcagttgacctttctcactgccacatcctggtgctggac
gaggccgacaagctgctctcccaggaattcatggagatcatcgacgacctgtacacttac
ctcccttctcagctgcagtccatgctcttctctgccacgttcccggtgacggtgaagacg
ttcgcggagcgccacctgcacaacccctacgagatcaacctgatggacgagctgaccttg
aagggtgtaacgcagtactatgctttcgtcgaggagcgccagaagatccactgcctcaac
acgctcttcaacaagctgcaaatcaaccagtctatcatcttctgtaatagcgtcaaccgc
gtggagctactcgcgaagaagattactcagctcggctatagctgctactacatccacgct
cgcatgcagcagcagcaccgtaatcgcgtcttccacgacttccgcgagggccactgccgt
aacctcgtctgctccgatctcatcacccgtggtatcgatattcaggccgtgaacgtcgtc
atcaacttcgacttccccaagtacgccgaaacgtacctgcaccgcatcggccgctccggt
cgcttcggtcatctcggtgtcgccatcaactttgtgacgtacgatgaccgctataatgtc
taccgcatcgagcaggagctggacacagagatcaagccgatcccggctgagatcgacccc
gagttgtacgcagcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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