KEGG   Companilactobacillus farciminis: LF20184_05325
Entry
LF20184_05325     CDS       T06098                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
lfm  Companilactobacillus farciminis
Pathway
lfm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lfm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LF20184_05325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lfm03400]
    LF20184_05325
Enzymes [BR:lfm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LF20184_05325
DNA repair and recombination proteins [BR:lfm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LF20184_05325
SSDB
Motif
Pfam: PriA_3primeBD ResIII PriA_C DEAD PriA_CRR Helicase_C PIF1 zinc-ribbons_6 SLFN-g3_helicase AAA_30 AAA_19 T2SSE AAA_22
Other DBs
NCBI-ProteinID: ATO46205
Position
1091096..1093504
AA seq 802 aa
MSVAEIIVDVPTMQTNRPFEYEIPDSLAEVVVAGMRVEVPFGRGKRKIQGFVMKVKDKSD
FQGKLKPITRVIDLKPVLSDEMLKLSYWLADQTYSFQISCLQTMLPSVMRAKYQQFVIPI
VKDDPEVQALLSNQDSLEITSSLDDQTIRLINKLRKNNKVDIQYVVKNKAVQVKRQAVTT
DLNVIQLHEAKSKLRANASSQIKLLAFLADHLQELPIEYNVLEKDYGISRSAIKTAEKNG
LLKTTEVTKLRKPVGITPEQTTKLALTSEQQVAVDEISQAITEESAQTFLIEGVTGSGKT
EVYLQTIEKALQQDKTALMLVPEISLTPQMVNRVVGRFGDQVAVLHSGLSNGERYDEWTR
IENHEVKVVVGARSAVFAPLDKIGLIIIDEEHEASYKQDDNPRYHARDVALWRAKVNKCP
VVLGSATPSLESRARAEKGVYHLIRMKKRINNQTLPHVQIVDMRDSENSAVKGDFSPVLQ
TSIQETLDNHDQAIILLNRRGYSSFMMCRECGFVLKCPNCDVSLTYHKDLRRMKCHYCGH
EESVPNMCPNCHSKKIGFYGTGTQNIEQQLNDLFPQARVLRMDVDTTRRKDAHAKILQQF
GQHKADILLGTQMIAKGLDFPDVTLVGVINADTTLSLSDYRASERTFQLLTQVSGRAGRA
QKTGHVVIQTFNPDHYAIKDAAKQDYETFFKQEMYLRHQSNYTPYYFTTLISVANQDEGQ
TLKQAYWLKKQLQTALSKDAILLGPSPTMISRKQNKYYYQIIVKYKHEPKLHERLLEILN
ETQADAKKGFTIAIDNEPQHID
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgtcagtagcagagataatcgttgatgtaccgacaatgcaaacgaatcgaccatttgaa
tatgaaattcctgatagtttagctgaagtagtcgttgccggaatgcgcgttgaagttcct
tttggacgtggcaagagaaaaatccaaggttttgtcatgaaggtaaaggataaaagcgac
ttccaaggcaaattaaaacccatcactcgagtgatagatttgaaacccgttttatcagat
gaaatgctgaaattatcgtattggttagctgatcaaacgtattctttccaaatctcttgt
ctacaaacaatgttgcctagcgtgatgcgtgctaaatatcagcaattcgtaattccaatt
gtaaaagacgaccctgaagttcaagcattattatccaatcaagatagtttagaaattact
agttcgcttgatgatcaaacgattcgtcttattaataaattacgtaaaaacaacaaagtc
gatattcaatatgttgttaaaaataaagccgttcaagtaaaacgacaagctgttacgacg
gatttgaatgttattcaattacatgaagctaagagtaaattgcgggcaaatgcttcttca
caaattaaattattagcttttttggctgatcatttacaagaattgccaattgaatacaat
gttttggaaaaagattacggcatctccagatcagctatcaaaacagctgaaaaaaatggt
ttgctaaaaacgactgaagttacgaaattgcgtaaaccagttggtatcacaccagaacag
acgactaaattggctttgacctcggagcaacaagtggccgtggatgaaatttctcaagct
attacagaagaatcggctcaaacctttttgattgaaggtgtaactggcagtggtaagacg
gaagtctatttgcagacgattgaaaaagctttgcaacaagacaaaacggctttgatgcta
gtcccagaaatttctctgacgccacaaatggtcaaccgagtcgtgggtcgttttggtgat
caagtagcggtgttacattctggattgtctaatggcgagcgatacgatgaatggacgaga
attgaaaatcacgaagtaaaagtcgttgtcggagcaagaagtgctgtttttgcaccgcta
gataaaattggcttaataattatcgatgaggaacacgaagctagttataagcaagacgac
aatccaagataccatgctcgtgacgtagcgttatggcgggctaaggtcaataaatgtccg
gttgtcttgggtagcgctactccgtcactagagtcaagagctcgagctgagaagggcgtt
tatcacttgataaggatgaaaaaaagaatcaacaatcaaaccttgccccacgttcaaatc
gtggacatgcgtgattctgagaattcagcagtcaaaggcgacttttcaccggtcttgcaa
actagtattcaagaaactttggacaatcatgatcaagcaattatcttgttgaatcgacgt
ggatattcatcgtttatgatgtgtcgtgaatgtggttttgttttgaaatgtcctaattgc
gatgtctcgttgacttatcacaaagatttaagaaggatgaaatgtcattattgtggacat
gaggaatctgttcccaatatgtgtcctaattgccacagtaaaaagatcggcttttacggt
actggtacgcaaaatattgaacaacagttaaatgacctttttccacaggctagagttttg
cgaatggatgttgatacgactagaagaaaggacgctcacgcaaaaattttgcaacagttt
ggccagcataaggctgatattttgttgggaacgcagatgattgctaaaggattggatttc
cctgacgttactttggttggcgtaatcaatgccgatacgacgttgagcttgtctgattat
cgggctagtgaaaggacctttcaattgttaactcaagtcagtggtcgagctggtcgggcc
caaaaaactggtcatgtagtaattcagaccttcaatcccgatcactatgcgataaaagat
gctgccaaacaagactatgagacgttcttcaaacaagaaatgtacttacggcatcaatct
aattacacgccatattattttacgaccttgatcagcgttgccaatcaagatgaaggtcaa
actttaaagcaagcctattggttgaaaaaacagcttcaaacggctttatcaaaggatgca
attttgttgggaccaagtccaacgatgatttctcggaaacaaaacaaatattattatcaa
attattgtaaaatataaacatgagccaaaattgcacgaacgattgctcgaaatcttgaat
gaaactcaagcggatgctaaaaaaggttttacgattgcaatcgataatgaaccacaacac
attgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system