KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_163615
Entry
LOTGIDRAFT_163615 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lgi03041]
    LOTGIDRAFT_163615
Enzymes [BR:lgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LOTGIDRAFT_163615
Spliceosome [BR:lgi03041]
 Complex C
  Other components
   Complex C specific factors
    LOTGIDRAFT_163615
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC UTP25 SecA_DEAD zf-C2H2_10 ERCC3_RAD25_C EutH zf-CCHC_6
Other DBs
NCBI-GeneID: 20239466
NCBI-ProteinID: XP_009058354
JGI: 163615
UniProt: V4A307
Position
Unknown
AA seq 613 aa
MYSQRKNEKSSSESDDDYVPYVPIKQRKKQQMQAIEKKLGRTVATIKQEEEKKESTNDEE
EVEEDPESSVGPNAHISLLDQHSELKKKAEAKKETAREKLLKEEEKILESVAEKKALMGV
AELAKGIQYEDPIKTGWRPPRYIMNMPESKHEKLRKKWHILVEGDDMPPPIKSFQEMKFP
KPIITALKKKGINKPSPIQVQGIPAVLSGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKR
LPFMKGEGPYGLIICPSRELAKQTYEIINFYVKHLENDGYPLLRTALCMGGMAVKEQLDV
IKRGVHIMVATPGRLMDMLDKKMINLDVCRYLSIDEADRMIDMGFEEDVRTIFSYFKGQR
QTLLFSATMPKKIQNFARSALVKPVTVNVGRAGAANLDVIQEVENVKQEAKVVYLLESLQ
KTAPPVLVFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERSRSVDQFRQGEKDVLVAT
DVASKGLDFPNIQHVINYDMPEDIENYVHRIGRTGRCGKTGLATTYINKSIDESILLDLK
HLLMEAKQKVPPFLSSYVSESEKYLDLGGEVGCSYCGGLGHRIADCPKLEAMQTKQAQNI
GRRDYLANSSADW
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgtattcacagagaaaaaatgaaaaatcaagttctgaatcagatgacgattatgtccca
tacgtaccaattaaacaaagaaaaaaacagcagatgcaagctattgagaagaaactgggt
cgaacagttgcgactataaaacaagaagaagagaaaaaagaaagtacaaatgatgaagaa
gaagttgaagaagatccagaatcttctgtgggtccaaacgctcatatcagtttgttagat
caacacagtgaactcaagaagaaagcagaagctaagaaagaaacagcgagagaaaagttg
ttaaaagaagaagaaaagattctagagagtgttgctgagaagaaagctttaatgggcgtg
gctgagttagcaaagggtatacaatatgaagatcctattaaaactggatggagaccacca
agatacattatgaacatgccagaatccaaacatgaaaaactccgcaagaaatggcatata
ctggtagaaggtgatgacatgcctccacccatcaaatcatttcaagagatgaaatttcct
aaaccaataattacagctttaaaaaagaaaggaatcaacaagccatcacctatacaagtc
caggggatccctgcagtgttatcaggaagagatatgatagggatagccttcacaggatct
ggtaaaacattagtctttacattacctatcatcatgttttcacttgaacaagagaaacga
ctaccatttatgaaaggagaaggcccttatggtctgattatctgtccttctagagaattg
gcaaaacagacatatgaaataataaatttttatgtaaaacatctagaaaatgatggatat
ccactattacgtaccgcattgtgtatgggaggtatggctgttaaagaacaacttgatgtt
attaagagaggtgtacatataatggtagctaccccaggaaggttaatggatatgttagat
aaaaagatgattaatttagatgtatgtaggtatctcagtatagatgaagctgatagaatg
atcgatatgggatttgaagaagatgtcagaacaattttctcttattttaagggacaaaga
cagacattgttattttcagctactatgccaaagaaaattcagaattttgctcggagtgct
ctagtaaaacctgtaacagtaaatgttggaagagcgggtgctgctaatctagatgttata
caggaggtggaaaatgtcaaacaggaagctaaagttgtatatttattagagagtttacag
aagacagctccacctgtgttagtatttgcagagaagaaacaagatgtagatgctatacat
gaatatttattattgaaaggtgttgaagctgtagctatccatggaggaaaagatcaagaa
gaaagaagtcgatctgtagatcagtttagacaaggagagaaagatgtattagtagctact
gatgtagcatctaaaggtttagatttccccaatatacaacatgttattaattatgatatg
cctgaagatattgaaaattatgtacatcgtattgggcgtacaggaagatgtggtaaaact
ggtttagctacaacatatattaataaatctattgatgaatcaatactgttggatttgaaa
catttattaatggaagcgaaacagaaggtaccaccattcttatcatcttacgtatctgaa
agtgaaaaatatcttgatttgggaggtgaagttggatgttcttactgtggtggtttgggt
catcgtattgctgattgtcctaaattagaggccatgcagaccaagcaagctcagaacatt
ggacgaagagactatttggccaatagcagtgctgattggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (89)   

Download RDF
DBGET integrated database retrieval system