KEGG   Lysinibacillus varians: T479_05570
Entry
T479_05570        CDS       T03062                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
lgy  Lysinibacillus varians
Pathway
lgy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    T479_05570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgy03400]
    T479_05570
DNA repair and recombination proteins [BR:lgy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     T479_05570
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_29 AAA_14 AAA_28 AAA_23 nSTAND3 T2SSE
Other DBs
NCBI-ProteinID: AHN21014
UniProt: A0A806LLN2
Position
1181704..1184271
AA seq 855 aa
MTTYTPMMQQYLQVKEDYQDAFLFFRLGDFYEMFFEDAINASQLLEITLTSRDAGAKERI
PMCGVPHHSAKNYIETLVQKGYKVAICEQTEDPKQAKGVVKREVVQLITPGTIMEGKALD
GKSNHYIGAAEQLDATTFGYAYLDLSTGEAIASSIEGDGKALLMQMQAYGIRELIVTESL
QLLLAEHAINVGIVLSVEEDEMAMDKAASYLEAVPATIQVACLRLLHYIDKTQMRSLSHI
QAFTFNEMKNYLRIDSSSKRNLELIQSIRGGDQKGTLLWLLDDTVTAMGGRKLKQWLHQP
LASRSAIEARLAMVSDLLEEYFVRSELQSSLKQVYDLERLAGRVAFGNVGGRDLAQLRDS
LRQVPIIQQQLIGAQKETLQKLGATLDTCADVEALLARAITDNPPITIKEGDVIRDGYNE
RLDELRYASRNGKDWIAQLEQEERTKTGIKNLKIGYNRIFGYYIEITKSNIHLADLTRYE
RKQTLANAERYITQELKEKEALILNAEEESLALEYNLFVEIREQLKSYIPRVQALAASIS
ELDVLLSFASVSEKYRFTKPEFHAGRALEIIEGRHPVVEKMLNKQMYVPNDCVLEENHNM
MLITGPNMSGKSTYMRQVALIVVMAQMGCYVPAEKARLPITDQIFTRIGAADDLAAGQST
FMVEMLESQHAIMHATENSLMLFDEIGRGTSTYDGMSLAQSMMEYIHDKIGANTLFSTHY
HELTALEKDLPRLQNVHVSATEKNGTVVFLHKVKKGAADKSYGIHVAQLAQLPEEILSRA
RILLENFEAGKALPVSQEVVEQPVQMSLFTEQEPLPSAEAEVLRNLEKVNILGTSPMQAM
NILYELQQQLVNAKK
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgacaacctatacaccaatgatgcaacaatatttgcaagtcaaagaagattatcaggat
gcttttttattttttagattaggtgacttttacgaaatgttttttgaagatgccattaat
gcatcacaactattagaaattacattaacgagtcgagatgcaggtgccaaggagcgtatt
ccgatgtgtggcgtgccacatcactcggctaaaaattatatagaaacacttgtgcaaaaa
ggttataaagttgcaatttgtgagcaaacagaggatccaaagcaagcaaagggcgtagtc
aaacgtgaagtagtccaactgattactcccggtaccattatggaagggaaggcgctagat
ggtaaaagcaatcattacattggcgcagcagaacagctggatgctactacatttggctat
gcctacttggatttatctacaggtgaagcgattgcctcatcgattgagggggatgggaaa
gcccttcttatgcaaatgcaggcatatggtattcgagaattaatcgtgacggagagctta
cagcttttgttagcagaacatgcaatcaatgtcggcattgtactatccgttgaagaagac
gaaatggcgatggacaaagcagccagctatttagaagcagtgccagcaactatacaagtg
gcctgcctgcgattacttcattatatagataagacacaaatgcggtcactttcgcatatt
caagcctttacctttaatgaaatgaaaaactatttacgtattgactctagttcgaaacga
aatttagagcttatacaatccattcgtggcggcgaccaaaaaggtacgttgttatggcta
ttagatgacaccgttactgcgatgggggggcgcaagctgaaacaatggctacatcaacca
ttagcctcacgttcagctattgaggcaagacttgcaatggtcagtgatttattagaagaa
tattttgtaagatcagaattacaatcttccttaaaacaagtctatgatttagaacgttta
gcgggtcgtgtagctttcggtaatgtaggcggtcgtgacttagcacagcttcgtgattca
ttacgtcaagttccaattattcaacaacagctaattggagcacaaaaagaaacattgcaa
aagctaggggcaacactcgatacatgtgcggacgttgaagctttattagcgcgtgctata
acagataatccaccgattaccattaaagaaggcgatgtgattcgtgatggttataacgaa
cgattagatgaacttcgctatgcatctcgcaatgggaaggactggattgcccagttagaa
caggaagaacgtacaaaaacaggcattaaaaacttgaaaattggctataaccgcattttt
ggctactatatagaaattacaaagtccaatattcatttggcggatttaacacgctatgaa
cggaagcaaacacttgcaaatgcagagcgttacattacacaggaattaaaagaaaaagag
gcacttattttgaatgcagaggaagaaagcttagctttagagtacaacctcttcgttgaa
attcgtgaacaattaaaatcatatattccacgggtacaagcactagctgcgagtataagt
gaattagatgtattgcttagctttgcaagcgtctcagaaaaatatcgttttacaaagcca
gaatttcacgcgggtcgtgcgctagaaattattgaaggtcgtcaccctgtagttgagaaa
atgctcaataagcaaatgtatgtaccgaatgattgcgtacttgaagaaaatcacaatatg
atgctcattactgggccgaatatgtccggtaaaagtacatatatgcgccaagttgctctg
attgttgtaatggcacaaatgggatgctatgtaccagcggaaaaggcgcgattaccaatt
acagatcaaattttcacacggattggagctgcagatgatttagctgctggacaatcaaca
tttatggtagaaatgctagaatcacagcatgcgattatgcatgccactgaaaatagctta
atgctgtttgatgaaattggtcgaggtacttctacgtatgatggaatgagtcttgcgcaa
tccatgatggaatatattcatgacaaaataggtgccaatacccttttctctacgcattat
catgaattgacagctttagaaaaggatttacctcgattacaaaatgtgcatgtttctgcc
actgaaaagaatggcacggttgtctttttacacaaggtgaaaaagggagcggccgataag
tcttatggcattcatgtggcgcaattggcacaattaccagaggaaattttatcgagagct
cgtatattgctcgaaaactttgaagcaggaaaagcattaccggtatcacaagaggtcgtt
gaacagcccgtgcaaatgtcattatttacggaacaagagccgttgccttcagctgaggct
gaagtattgagaaacttggagaaggtgaatatccttggtacttcaccaatgcaggctatg
aatatcttatacgaattacaacagcaattagtcaacgctaaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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