KEGG   Linepithema humile (Argentine ant): 105678224
Entry
105678224         CDS       T04898                                 
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
  KO
K14780  ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
Organism
lhu  Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lhu03009]
    105678224
Enzymes [BR:lhu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     105678224
Ribosome biogenesis [BR:lhu03009]
 Eukaryotic type
  90S particles
   Helicases
    105678224
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD AAA_22 AAA_19 ResIII nSTAND3 ATPase Flavi_DEAD T2SSE Herpes_ori_bp HA2_N Helicase_RecD AAA_30 FtsK_SpoIIIE AAA_23 AAA_16
Other DBs
NCBI-GeneID: 105678224
NCBI-ProteinID: XP_012232791
Position
Unknown
AA seq 1178 aa
MGRKRYNWKSRAVANVEIDNSTTKKIAVDIEHHADNYDNCNALVLPTKKRKTKKIDKKVT
TRVLSKKCRKQLEKVIEQKKKKLKRATLLENLAKVQVSPAELQQYVSLTSLQNKGLKRHF
RELETPISKLKCKTSEEEESNATEAGVNSIKGSKKKRLAILDNKKQDKDTSNQNVVGFES
SDSNSECDIESDNEAPDVINSIVTPDIMTSEMSDEKDLPKNVDERTIPTKSQGFDKPEER
VQQQNNNPNIRTPSVFVPLNRKQEIQSVRLKLPVVAEEQIIVETINENPVVIITGETGSG
KTTQVPQFLYEAGYAQNKLIGITEPRRVAAMSMSKRVAEEMNLTQKQVSYLIRFEGNVTE
ETKIKFMTDGVLLKEIQSDFLLTKYSVIILDEAHERSVYTDILIGLLSRIVPLRNKRNDP
LKLIIMSATLRVEEFVENVRLFKVKPPVITIQTRQFPVTIHFNRRTSEDYVNEALRKAIK
IHTRLPEGGILIFLTGQQEVHTIVRKLRKAFPLRKNKLFRQQVKSINLEKSKSPSKEVTN
ETQSEEDDTDDDFDAEEALRRNKQRQKKRIVLPNINLDDYSVIPTDDTHEDLIDAQDDED
EDEDEDMIDFKGLTNSQPLWVLPLYSFLPSHKQARVFEAPPEGCRLCVVSTNVAETSLTI
PNVRYVIDSGRCKTRMYDKVTGVSTYHICYTNKAAASQRAGRAGRTQPGHCYRLFSSAMY
NNQFEEYGQSEIQRKPVDDLLLQMKAMHIDKVVNFPFPTPPDIVQLKSAEKRLMLLGALQ
QPPKKQEETYCAKVTPLGHSIAAFPVAPRYGKMLALSHQHNLLKYTICMVAALSVQEVLI
EALSMEGSAKNKWLQIRRHWAGTGNSLLLGDPMVLIKAIAAAEYAGSEGKLLSFCEENGL
RHKAVVEIKKLRQQLTNEINLNIPDLNLSIDPKMTLPTNTEAKLLRQIVLAGMVDQVAKK
VSLDEVKEDQDKAKWKYAYRTPEMEEPVFMHSSCALRKVSPEWVVYQEVYETNKMYMRGI
TAIEPEWLPKFAPALCHLSEPLADPPPRYNSETGKIICRVSGTFGRAGWELPPINIEHPL
TVDGVRLFAYFFLEGQVCPKLKRFVPSLLTTPGSITKSWAKLIPRTQAMTQMLLSHGIMS
KDKLLDTWSLDKKFLLSAYQKWLPESAHTEVALLWPPL
NT seq 3537 nt   +upstreamnt  +downstreamnt
atggggagaaaaaggtataattggaagtctagagctgttgcaaatgtagagatcgataat
tctaccaccaagaagattgcagtggatatcgaacatcatgcagataattatgataattgt
aatgctcttgttttacccactaaaaagagaaaaacaaagaagatagataaaaaagtaaca
actcgggtactatcaaaaaaatgcagaaaacaattggagaaagtaatagagcaaaagaag
aaaaagttaaagagagcgacattgttagaaaatttggcaaaagtgcaagtgtctccagct
gaattgcaacaatatgtgagtttaacatctttgcaaaataaaggtttgaagcgtcatttt
cgagaactagagacaccaatctcaaaattgaaatgcaagacaagtgaagaagaagaaagc
aatgcaacagaagctggtgtaaattccattaaagggagtaaaaagaagagattagctatt
ttggataataaaaaacaagacaaagatacatctaatcaaaatgtggttggatttgaatct
agtgacagtaacagtgaatgtgatattgaaagtgacaatgaagcaccagatgttatcaat
agtattgttactcctgacattatgacaagtgaaatgagtgatgagaaagatcttcctaaa
aatgtagatgagagaacaattccgactaagtcacagggatttgataaaccagaagaaaga
gtacaacagcaaaataataatcctaacattcgcacaccttctgtatttgtacctcttaat
agaaagcaggaaatacagtcagttagattaaaactacccgttgttgcggaagaacaaatt
atagttgaaacaataaatgaaaatccagtagttataattactggagagacaggaagtgga
aagacaacacaagtgcctcaatttttatacgaagctggatacgctcaaaataagttaatt
gggataaccgaaccaagacgagtggcagcaatgtcaatgagtaagcgcgtggctgaagaa
atgaatcttactcaaaaacaggtttcatatttgattcgttttgagggaaatgtcacagag
gaaacaaagatcaaattcatgaccgatggtgttttgttgaaagaaattcaaagtgatttt
ctattgacaaagtattctgtaattatactggatgaggcacacgaacgcagcgtgtacact
gatatcctgataggtctattgtcgagaattgttcctcttcgtaataaacgcaatgatcct
ttaaaactaataattatgtcggccacattgcgtgtggaagaattcgtagaaaatgtgagg
ctgtttaaggtgaaaccgccagtaatcacgattcaaacacgacaatttcccgtaacgata
cacttcaatagacgtacaagcgaggattatgtcaatgaagcattgcgcaaagcgataaag
atacatactcgtctaccagaaggcggtatattaatatttttaacaggtcaacaggaagtg
cacacgattgtacgtaaattgcgcaaagcatttccactgagaaagaataaactttttcga
caacaagttaagtccatcaacttggaaaaaagcaagtcaccctcgaaagaagtaacaaac
gagacgcaaagtgaagaggatgataccgatgatgacttcgatgccgaggaagcgttacgc
cgcaacaagcagaggcaaaagaaacggattgtacttccgaatatcaatctggacgattat
tcagtaattcccactgacgatacgcatgaagatttaatcgatgcacaggatgacgaagac
gaggatgaggacgaagacatgatcgatttcaagggattgacgaactctcagccgttatgg
gttctgcccctctactcttttttgcctagtcataaacaagccagagtatttgaagcgccg
ccggaaggatgtcgcttgtgtgtggtgtctaccaatgttgcggaaacttcactaacgatt
cccaacgttagatacgtgatagatagtggtcgttgtaagactagaatgtacgataaagta
actggtgtgagcacatatcatatttgctacacaaataaagcagcggccagtcaacgcgcc
ggcagagcgggcaggacacaacctggtcattgctacagattattctcatcagctatgtat
aataatcagttcgaggaatacggccaatcagagatacaacggaaaccagtggatgattta
ctactgcaaatgaaggcaatgcatatagacaaggtcgtgaatttcccgtttcctacgccg
ccggacattgtgcaactgaaatccgcggaaaaacgccttatgttactcggagcgttgcag
caaccaccgaagaaacaggaagaaacgtattgcgcgaaagtaacgcctcttgggcatagt
atcgccgcgtttccggttgctccacgttacggcaaaatgctggcattgtcgcatcagcat
aacttgttgaaatacacaatatgcatggtggcggctctcagcgttcaagaagtgttaata
gaagcgcttagcatggagggttcggctaagaacaaatggctgcaaatacgtcgtcattgg
gctggtactggcaatagtttgcttcttggtgatccgatggttctgataaaagccattgca
gctgctgaatatgcgggatctgaaggaaagttgttgtctttctgcgaagaaaatggcttg
agacataaagctgtagtcgagataaagaaacttagacaacagctaacaaatgaaattaat
ttaaatataccggacctaaatttgtctattgacccaaaaatgacgctaccaactaataca
gaagcgaaattattgcgtcaaatagttctcgcgggtatggtagatcaagtggcaaagaaa
gtttcacttgacgaggtgaaggaggatcaggacaaggcaaagtggaagtatgcttacagg
acgccagaaatggaagaacctgtgttcatgcattcttcgtgtgccctacggaaagttagt
cctgaatgggtggtttatcaagaggtgtatgaaacaaataagatgtacatgcgcggtatc
acagcgatagaacctgaatggttgccgaaatttgcacctgcgttatgtcaccttagcgaa
ccattggctgatccgccaccaagatataattctgaaaccggaaaaatcatctgtcgcgtg
tctggcacatttggaagagccggatgggaactaccgccaataaacatagaacatccattg
acggtggatggtgttagattatttgcctattttttcttggagggtcaagtgtgtcctaag
ttgaaacgattcgtgccatcgttactgacgacacctggcagcatcactaaatcatgggcc
aaattaataccacgtacacaagcgatgacacaaatgctattatcgcatggaattatgtcc
aaagataaactactggatacttggagtttggacaagaaatttttactatcagcttatcag
aagtggctgccggaatctgcgcatacggaagtagcacttttatggccacctttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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