KEGG   Leishmania infantum: LINJ_27_0920
Entry
LINJ_27_0920      CDS       T01112                                 
Name
(RefSeq) putative vesicular transport protein (CDC48 homologue)
  KO
K14571  ribosome biogenesis ATPase
Organism
lif  Leishmania infantum
Pathway
lif03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LINJ_27_0920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lif03009]
    LINJ_27_0920
Ribosome biogenesis [BR:lif03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    LINJ_27_0920
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_22 AAA_14 AAA_33 RNA_helicase AAA_2 AAA_28 TIP49 IstB_IS21 AAA_18 nSTAND3 Zeta_toxin AAA_3 Mg_chelatase AAA_11 TsaE ABC_tran NACHT AAA_17 AAA_24 Vps4_C Parvo_NS1 AAA_7 ATPase_2 NB-ARC Sigma54_activat NTPase_1 Rad17 Sigma54_activ_2 bpMoxR
Other DBs
NCBI-GeneID: 5070049
NCBI-ProteinID: XP_001466340
UniProt: A4I2Q7
Position
27:complement(446025..448025)
AA seq 666 aa
MPGMSDRLKDRLKQMARQTPNGYRKQRPGSGPRHFADDNYPFHAKRPRDEEEEGPQSSKS
GSSRVHSGKEAGKSASGDGEGEVLGVIPKITLEDMGGLAKELPVIKELIELPVRMPHLFN
CLGADPPCGVLLHGPPGVGKTKLVHAIAGSLQVPLFFVAAPEIVSGISGDSEAKLRNLFM
DAIAAAPSIVFIDEIDTIAGRREDAQRAMESRIVGQLLTCMDQVSQAWRQHNKVVCVMGA
TNRPEALDTALRRAGRFDREIALGIPSIDERQSILSIICAKINLSDGVDFFELANMTPGY
VGADLHLLVKEACILAIRRKYKELDERGAVDDVKTEELSGFCVTFDELKEATTRVQPSAM
REGFTTIPNVSWDDVGALEDVREELMTSILQPIRAPKLHHRFGLDHPVGVLLYGPPGCGK
TLVAKAIANQSGANFISIKGPELLNKFVGESERSVRMVFARGRASAPCVLFFDELDALAP
RRGSDRANPSSERVVNQLLTELDGVEGRKDVYVIGATNRPDMIDSAMLRPGRLDKLLYVP
LPSPAQRESILRTHARKYPVDAEVSLERLAHDERLTGFSGADLAALMREASLTALKGVYK
SHTKDELEELERDITGKSADTADLPTITADNFEASLAKIKPSVSAADRANYENMSIEIRN
NAKNTD
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgccaggcatgagtgaccgcctcaaggacaggctgaagcagatggctcggcagaccccc
aacgggtaccgtaagcagcgccccggcagcggcccacggcacttcgccgacgacaactac
ccttttcacgcaaagcggccgcgtgacgaggaggaggaagggccgcagagtagcaagtcc
ggcagcagccgtgttcacagtggcaaggaggcgggaaagagcgccagcggcgacggggag
ggcgaggtgctcggtgtcatcccgaagatcaccctcgaagacatgggcggcttggccaag
gagctgccggtaataaaagagctcattgagctgcccgtccgcatgccgcacctctttaac
tgcctcggtgcagatccgccgtgcggcgtcctgctgcatggcccgccgggtgtcggcaag
acaaagctcgtccacgccatcgccggctcgctgcaggtgcccctcttttttgtcgcggcg
ccagagatcgtctccggcatcagcggtgacagcgaggcaaagctgaggaacttgttcatg
gacgccatagcggcggcgccgagcattgttttcatcgacgagatcgacaccatcgcgggc
cgtcgcgaggacgcccagcgcgcaatggagagtcgcatcgttggacagctgcttacgtgc
atggatcaggtgtcgcaggcctggcgacagcacaacaaggtggtttgcgtcatgggggcg
acaaaccgcccagaggcgttggacacggcgctgcgccgcgccggccggttcgatcgggaa
attgccctcggcatcccctcaatcgacgagcgacagagcatcctcagtatcatctgcgcg
aaaatcaacttgtccgacggcgtcgatttctttgagctcgccaacatgacccccggctac
gtcggcgcagacctgcaccttctcgtcaaggaggcttgcatcctcgccatccgccgcaag
tacaaggagctggacgagcgtggcgctgtggacgatgtaaagacggaagagctctccggg
ttctgcgtcacattcgatgagctgaaggaggcgacgacgcgggtgcagccgtcggcgatg
cgagagggcttcacgacgatcccgaacgtctcgtgggacgacgtcggcgccctcgaggac
gtgcgcgaggagctcatgaccagcatcttgcagcctatccgcgccccgaagttgcatcac
cgcttcggtctcgaccaccccgtcggcgtgctgctctacggcccaccgggctgcggcaag
acgctggtcgcaaaggcaatcgcgaaccaatcgggcgccaactttatctccatcaagggt
ccagagctgctcaacaagttcgttggcgagagtgagcgcagcgtgcgcatggtcttcgcg
cgtgggcgggccagcgccccatgcgtcctctttttcgacgagctggatgcactggcaccg
cgccgcgggtcggaccgggcaaacccgagcagcgagcgcgtagtgaaccagctgctgacc
gagctggacggtgtggaggggcgcaaggatgtttacgtgatcggggccacgaaccgcccc
gatatgatcgattctgccatgctgcgcccaggtcgcctggacaaactgttatacgtgccg
ctgccgtcgcctgcgcagcgtgaatcgattctgcggacgcacgcccgcaagtacccggtg
gatgccgaggtgagcctggaaaggctggcgcatgacgagcggctcaccggcttcagcggc
gccgacttggccgccctaatgcgcgaggcgtcgctgaccgcactgaagggcgtgtacaag
tcccacacgaaagacgagctggaggagctggagcgcgacatcaccggcaagagcgccgat
acggcggatctgcccaccattacggcagacaacttcgaggcgagcttggcaaagatcaag
ccgtcggtgtctgcggcggatcgggcaaattatgagaacatgagcatcgagatacgcaac
aacgccaagaataccgactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (34)   
   Pfam (34)   
All databases (45)   

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