KEGG   Limnohabitans sp. 103DPR2: L103DPR2_00894
Entry
L103DPR2_00894    CDS       T04120                                 
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lim  Limnohabitans sp. 103DPR2
Pathway
lim03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    L103DPR2_00894 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lim03400]
    L103DPR2_00894 (mutM)
Enzymes [BR:lim01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     L103DPR2_00894 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     L103DPR2_00894 (mutM)
DNA repair and recombination proteins [BR:lim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     L103DPR2_00894 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N
Other DBs
NCBI-ProteinID: ALK91298
UniProt: A0A0P0ME37
Position
908059..908874
AA seq 271 aa
MPELPEVEVTRLSFASRIEGARVVALHMGKPLRWPLGVAPSVLVGQSVLRVRRRGKYLLL
DMDRGVLMLHLGMSGSLNFAPTQAPAGKHDHMDLVTTQGTLRLHDPRRFGAAVWSASEHH
EPALKLLSKLGMEPLTDGFELKLFQVGLKKRSAPIKQVLLAGDVVVGVGNIYASEALFMA
GIKPTVKADKVSGPRVAKLHAAIRQVLARAVEQGGSSLKDFVNAQGNTGYFQLEAAVYGR
TGLPCRTCETPIKQIVQGQRSTFYCPVCQKR
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcctgaattgcccgaagtagaagtcacccggctcagttttgccagccggattgaaggc
gcgcgcgttgtggccctgcacatgggcaagccattgcgttggcctttgggtgtggcccct
tcggttttggtggggcaaagcgtcttgcgcgtgcgcagacgcggcaagtacttgctgctg
gacatggaccgcggcgtgttgatgctgcacttgggcatgtcgggcagtttgaatttcgcc
ccaacgcaggcgcctgctggcaaacacgatcacatggacttggtcaccacccagggtact
ttgcgcttgcacgaccctcgaaggtttggcgctgccgtttggtcggcgtcagaacatcac
gagcctgccctgaaattgctcagcaaattgggcatggagcccctgaccgatggctttgaa
ttgaagttgtttcaagtagggcttaaaaagcgctctgcgcccatcaaacaagtgttgttg
gcgggtgatgtggtggtgggtgttggcaacatctatgcctcggaagccttgttcatggcc
ggtatcaaacctactgtgaaagccgacaaagtgagcggccctcgggtggccaagttgcac
gcggccattcgccaagtgttggcacgcgccgtcgaacagggcggcagcagcctcaaagat
tttgtgaatgcgcagggcaacaccgggtactttcaattggaagccgcggtgtatggccga
acgggcttgccttgccggacatgtgaaacgcccatcaagcaaattgtgcaggggcagcgc
tctactttttactgccccgtatgccaaaagcgataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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