KEGG   Legionella jordanis: NCTC11533_01169
Entry
NCTC11533_01169   CDS       T06275                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
ljr  Legionella jordanis
Pathway
ljr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ljr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NCTC11533_01169 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljr03400]
    NCTC11533_01169 (alkA)
Enzymes [BR:ljr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     NCTC11533_01169 (alkA)
DNA repair and recombination proteins [BR:ljr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NCTC11533_01169 (alkA)
SSDB
Motif
Pfam: HhH-GPD AlkA_N
Other DBs
NCBI-ProteinID: VEH12318
Position
1:complement(1249571..1250482)
AA seq 303 aa
MQQFQLIPMPPFRLDYTVAALRRRIKNIVDCWDGQSYSRLFLINSQLTCVKVSQDQNTQN
AHLMIECDRNLEVNDQSEITQVLERLLGLNKNLEDFYFFAGKNKPLSILISRFMGLKPPQ
YPSLFEALVNAISCQQISLDAGLEIQNRLIQFIDLSFKNDQQAHYVFPEPIHIANCSIQE
LKQLGYSKNKSETLKRLANAFLEKPDLFAQLRQFSNDDVIHFLCQFKGIGRWTAEYVLLR
GLGRLEVFPRDDVGAQNNLHRLLKLEEKPDANDTAAITASWHPYAGLIYFHLLLQRLFEK
SQT
NT seq 912 nt   +upstreamnt  +downstreamnt
atgcagcaatttcagttaatcccaatgcctccttttcgcctggactatacggttgcggct
ttaagaagaaggataaagaatattgttgattgctgggatgggcagtcttatagcaggcta
tttttaattaactcacaattaacatgtgttaaggtcagtcaagatcaaaatacgcaaaat
gcccatctgatgattgaatgcgatcgaaacttggaagttaatgatcaaagtgaaatcaca
caagttttagagcggcttttaggactgaataaaaatttagaggatttctatttttttgca
ggaaaaaacaagcctctttcaattctgatttcacgttttatgggacttaaacctccacaa
tacccttccttatttgaagctttggtgaatgcaatctcttgtcagcaaatttctttggat
gcgggtcttgaaattcaaaatcgattaatccaattcattgatttgagctttaaaaacgat
caacaggcacattatgtttttccggagcctatccacattgcaaattgctcaattcaagaa
ttaaaacaattggggtacagcaagaataaaagtgaaactttaaaacggcttgcgaatgcg
tttttggagaaacctgatctattcgcacaacttcgacaattttctaatgatgatgtcatc
catttcctatgtcaatttaaaggaattggccgttggactgcagagtacgtcttgttacga
ggactggggcgtttggaagtttttccgcgagatgatgtgggggcacagaacaatttacat
cgcttgcttaagcttgaagaaaaaccggatgccaacgacacggcggccattacagccagc
tggcatccctatgcgggcttgatttattttcatttgctattgcagcggttatttgaaaaa
tcgcaaacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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