KEGG   Lactococcus lactis subsp. lactis IO-1: lilo_0524
Entry
lilo_0524         CDS       T02485                                 
Symbol
clpC
Name
(GenBank) ATP-dependent protease ATP-binding subunit
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lls  Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:lls00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lls03110]
    lilo_0524 (clpC)
Chaperones and folding catalysts [BR:lls03110]
 Heat shock proteins
  HSP100
   lilo_0524 (clpC)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 AAA_16 AAA_22 Sigma54_activat AAA_14 AAA_7 Zeta_toxin nSTAND3 AAA_18 bpMoxR RsgA_GTPase ATPase_2 IstB_IS21 RuvB_N AAA_28 DUF815 ResIII DNA_pol3_delta2 Torsin AAA_24 PduV-EutP
Other DBs
NCBI-ProteinID: BAL50525
Position
557688..560138
AA seq 816 aa
MKFENIKYTPTLDRILEKAEEYAHQYQYGTIESAHLLAAMATTSGSIAYSLLAGMNVDSS
DLLIDLEDLSSHVKVKRSTLRFSPRAEEVMTAASFLAIHNNSEAVGTEHLLYALLQVEDG
FGLQLLKLQKINIVSLRKELEKRTGLKVPESKKAVTPMSKRKMAKGVAENSTTPTLDSVS
SDLTEEARLGKLDPMIGREAEIDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVN
GQVPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSSDPDVIIFIDELHTIIGA
GGGMDSVNDAANILKPALARGDFQMVGATTYHEYQKYIEKDEALERRLARINVDEPSPDE
AIAILQGLREKFEDYHQVKFTDQAIKSAVMLSVRYMTSRKLPDKAIDLLDEAAAAVKISV
KNQQTKRLDLEKELAEAQEELSEAVIKLDIKASRTKEKAVEKIADKIYKFSVKEDKRQEV
TDQAVVAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAISAVSRAIRRARSGV
ADSRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPP
GYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRN
TIIIMTSNLGATALRDDKTVGFGAKNITADYSAMKSRILEELKRHYRPEFLNRIDENIVF
HSLESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAVKLIAEVGFDPEYGARPLRKALQK
EVEDLLSEQLLSGEIKAGNHVSIGASNKKIKIAQIV
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgaaatttgaaaatataaaatatacaccaacgcttgaccgaattttagaaaaagcggaa
gagtatgctcaccaatatcaatatggcaccattgaaagtgctcatttactggctgcaatg
gcaacgacctcaggctcaattgcttacagccttcttgctggaatgaatgttgattcttct
gacttactgattgatttagaggatttatcaagtcatgttaaggtcaaacgttcaacttta
cgtttttcacctcgtgcagaagaagtgatgactgcggcaagttttttagcaattcataat
aactcagaagccgttggaacagaacacctgctttatgccctacttcaagtagaagatgga
tttggtcttcaacttctgaaattacaaaaaatcaatattgtatctttgcgaaaagagctt
gagaaaagaactggactcaaagttccagaaagtaaaaaagctgtgactccaatgtcaaaa
cgtaagatggcaaagggagttgcagaaaattcaacgacgccaacgttagactctgtatcc
tcagatttaaccgaagaagctcgcttgggtaaacttgacccaatgattggacgagaagct
gaaattgaccgtttgattcatattctcagccgcagaacaaaaaataaccctgtcttagtt
ggagagcccggtgttgggaaatcagcaattattgaaggtttggctcaaagaattgtcaat
ggtcaagttccaattggtttgatgaatagtcgaattatggctttgaatatggcgactgtt
gttgctgggacaaaatttagaggtgaatttgaggatcgcttgacagctattgttgaagaa
gttagcagtgatccagatgtcattattttcattgatgaattacacacaatcatcggtgct
ggtggcggaatggattctgtcaatgatgccgcaaatattttgaaaccagcgcttgctcgt
ggtgattttcaaatggtcggagcaacaacctatcatgaatatcaaaaatatattgaaaaa
gatgaagctttagaacggcgtttggcgagaataaatgttgacgagccaagtccagatgaa
gcgattgctatcttgcaaggcttacgtgaaaaatttgaagactatcatcaagtgaaattt
actgaccaagccattaaaagtgccgtaatgctcagcgttcgctatatgactagccgaaaa
ttgcctgacaaagccattgatttacttgatgaagctgcagcagcagtgaaaatttctgtc
aaaaatcaacaaacaaaacgtcttgatttagaaaaagaactagcggaagctcaagaagaa
ttatcagaagctgtcattaaacttgatatcaaagcgtctcgtacaaaagaaaaagcagtt
gaaaaaattgctgacaagatttataaattctcagtaaaagaagataaacgtcaagaagtt
actgatcaagctgttgttgctgttgcctcaacactgacaggcgttccaatcacacaaatg
actaagtctgaaagtgatcgtttaatcaatcttgaaaaagaattacacaaacgggttgtt
ggacaagaagaagctatttctgccgtttcaagagccattcgtcgggcacgttctggtgtt
gctgacagccgccgtccaatgggttctttcatgttccttggaccaacaggggtcggtaaa
accgaacttgctaaagcactggctgacagtgtgtttggtagtgaagataatatgattcgt
gttgacatgagtgaattcatggaaaaacattcaacttcacgcttgattggagctcctcca
gggtatgtaggttatgatgagggtggtcaattgacagaacgcgttcgtaataaaccttat
tctgttgttcttttagatgaagtcgaaaaagctcatcctgacgttttcaacatcatgttg
caaattctagatgatggctttgtgactgatactaaaggtcgcaaagttgatttcagaaat
acaattattatcatgacttcaaacttgggagcgactgctcttcgtgacgataagacagtt
ggttttggcgctaaaaatatcacagctgattattcagccatgaaatcaagaatattagaa
gagcttaaacgtcattatcgtcctgagtttcttaatcgaattgatgaaaatattgttttc
cattcattggaaagtcaagagattgaacaaattgttaaaattatgagtaaatctttgatt
aaacgtctggcagaacaagatattcatgttaaactcacaccgtcagcggtgaaactaatt
gctgaggtaggttttgacccagaatatggtgcacgtccgcttcgtaaggcacttcaaaaa
gaagtcgaagaccttttaagtgaacaattgctctctggtgaaatcaaagcaggtaatcat
gtttcaattggtgcatctaataaaaaaattaaaatcgctcaaattgtttga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (26)   
   Pfam (26)   
All databases (32)   

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