KEGG   Listeria monocytogenes SLCC7179 (serotype 3a): LMOSLCC7179_1301
Entry
LMOSLCC7179_1301  CDS       T02224                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
lmos  Listeria monocytogenes SLCC7179 (serotype 3a)
Pathway
lmos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMOSLCC7179_1301 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmos03019]
    LMOSLCC7179_1301 (pnp)
   03016 Transfer RNA biogenesis [BR:lmos03016]
    LMOSLCC7179_1301 (pnp)
Enzymes [BR:lmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     LMOSLCC7179_1301 (pnp)
Messenger RNA biogenesis [BR:lmos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LMOSLCC7179_1301 (pnp)
Transfer RNA biogenesis [BR:lmos03016]
 Prokaryotic type
  tRNA degradation factors
   LMOSLCC7179_1301 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 RNase_II_C_S1 S1_2 CvfB_2nd SPATA25 RICTOR_M DUF1773
Other DBs
NCBI-ProteinID: CBY60507
Position
1305996..1308167
AA seq 723 aa
MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAAVGSKKPRPGDFFPLTV
NYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLFAEGFRNEVQITSTVFSVD
QDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKYVINPTIEQTEKSDISLTVAG
TYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQQQIIAAVGKEKREIELFVSDPE
LEAEVKAASEGKMKTAIKTEEKKAREAAIEEVKEEILESYKAKELENESEILSEVAHILE
MIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVGMLPRVHGSGLFTRGQTQALSVCTLAP
LREHQIIDGLGTEEYKRFMHHYNFPQFSVGETGPRRAPGRREIGHGALGERALQYVIPSE
EEFPYTIRLVSEVLESNGSSSQASICGSTLAMLDAGVPIKAPVAGIAMGLVKLGDDYTIL
SDIQGMEDHFGDMDFKVAGTKDGITALQMDIKIDGLSRQILDEALTQAKEGRLHILEHLT
STISAPREELSAYAPKIITLNIKPEKIKDVIGPGGKQINAIIDETGVKIDIEQDGTVYIA
SQDQAMNRKAIAIIEDIVREVEVGEVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHER
VGKVEDILKLGDEVTVKVIEVDQQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKP
ESK
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgtctgaaaaacaagtattttcaacagagtgggcaggtaaaacattatctgttgaagta
ggtcaattagcaaaacaagcaagtggggcagccttaattcgttacggcgatacggttgtt
ttaacagccgcagtaggttctaaaaaaccacgtccaggcgactttttcccattaactgtt
aactatgaagaaaaaatgtattccgttggtaaagttcccggtggattcttaaaacgtgaa
ggacgtccaagtgaccgtgcgacattaacagcgcgtctaattgaccgaccaatccgtcca
ttatttgcagaaggtttccgtaatgaagttcaaattacatctactgttttcagtgtggat
caagattgttcgccagaaatggcagcaatgcttggatcttctgttgcattagttatttcc
gatattccatttgaaggaccaatcgctggtgttgacgttggtcgtatcgatggaaaatac
gttattaacccaacaatcgagcaaacagaaaaaagcgatattagcttaactgttgcagga
acttatgatgcaatcaacatggtagaggctggagcgaaagaagtttcagaagaagcaatg
cttgaagcaattatgtttggtcatgaagaaattaaacgtctttgtgaattccaacaacaa
attattgcggcagttggtaaagaaaaacgcgaaatcgaactttttgtaagcgatcctgaa
cttgaagcagaagtaaaagcagctagtgaaggtaaaatgaaaacagctatcaaaacagaa
gagaaaaaagcacgtgaagctgcaattgaagaagtaaaagaagaaattttagaaagctat
aaagcaaaagaattagaaaatgaatctgaaattcttagcgaagtagctcatattcttgaa
atgattgaaaaagatgaaatgcgtcgtctaatttctcaagataaaatccgtccagatggt
cgtaaagtaaacgaaattcgcccgctttcttctgaagttggcatgcttccacgtgtccat
ggttctggtttattcactcgtggccaaacacaagctctaagcgtgtgtacactggcaccg
cttcgtgaacaccaaattattgatggtctaggaacagaagagtacaaacgctttatgcac
cattataatttcccgcaatttagtgttggggaaactggccctcgtcgtgctccagggcgt
cgtgaaatcggtcacggtgcattaggcgaacgtgcattacaatatgttattccttccgaa
gaggaattcccttacacaatccgtttagtatcagaagttcttgaatctaacggatctagc
tctcaagcaagtatttgtggttctacacttgcaatgcttgatgctggtgttccaattaaa
gcgccagttgcaggtatcgcgatgggtcttgtaaaacttggagatgactacacaatcctt
tctgatatccaaggtatggaagatcactttggcgatatggactttaaagttgctggtaca
aaagacggtattacagcacttcaaatggatatcaaaatcgatggcttgagccgtcaaatt
ttggacgaagcattaacacaagcaaaagaaggacgcttacacattctagaacacttaact
agcacaattagcgcacctcgtgaagaactttctgcttatgctccaaaaatcatcacactt
aacatcaaacctgagaaaatcaaagatgttatcggacctggtggaaaacaaatcaatgca
attattgatgaaactggcgtaaaaattgatatcgaacaagatggtacagtgtacattgct
tcccaagatcaagcaatgaaccgtaaagcgattgctattatcgaagacatcgttcgtgaa
gttgaagtcggagaagtttatactggtaaagttcgtcgtatcgaaaaatttggtgccttt
gttgaattattcaaaggtacagatggtttagttcatatttctgaattagcgcatgaacgc
gttgggaaagtagaagatatcctaaaattaggtgatgaagttactgttaaagttatcgaa
gtagaccaacaaggccgcgttaacttatcacgtaaagctttgcttgagaaaaaagaacaa
ccagaaggcgataaaaaaccacaagcagagaaaaaattctatccaaaaacgaaaaaacca
gaatctaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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