KEGG   Listeria monocytogenes 07PF0776 (serotype 4b): MUO_08050
Entry
MUO_08050         CDS       T02040                                 
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lmp  Listeria monocytogenes 07PF0776 (serotype 4b)
Pathway
lmp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lmp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MUO_08050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmp03400]
    MUO_08050
Enzymes [BR:lmp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MUO_08050
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MUO_08050
DNA repair and recombination proteins [BR:lmp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MUO_08050
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Ribosomal_S13 Auto_anti-p27
Other DBs
NCBI-ProteinID: AFH80130
Position
complement(1577508..1578329)
AA seq 273 aa
MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF
LLFDLTNCTILSHLRMEGKFRLMDEKEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTN
KYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEIC
FEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYVNSQGKLGQYQDKLKV
YGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK
NT seq 822 nt   +upstreamnt  +downstreamnt
atgccagaaatgccggaagtagaaaatgtccgcgcaactttacaagaattagtcccaggt
aaaaaaatagatcaagtaattgttcgtgttccaaaaatgattgtatcaacaccacccgat
gagtttgtgcatatgcttgtcgggcaagaaatagagggtgtacgccgtcgtggtaaattc
ttactttttgacttaaccaactgtacgattttatcgcatttacgaatggaaggtaaattt
cggttaatggatgaaaaggaagaggttagcaagcatacgcatattatttttcattttgaa
gatcacacggaattgcgttttttagatgtgcgaaaatttggcacgatggaagtaacaaat
aaatacggtgagggtgaaacgcggtcgattaaaaagcttggcccagaaccgctgacgcaa
gcctttacatcaacggattttgcgactggtgtaaaaaaaacaagccgcgccatcaaaacg
gctttacttgatcaaaagttagtagccggagtaggaaatatttatgcggatgaaatttgt
tttgaagcaaaagtgcgcccggaaagagcagctaactcactttcagacaaagaaatcaaa
cgtatttttgaagcgacgaaaagtattatgactgaagctgtagcacttggtggctccact
gtcagaacatatgtaaattcgcaagggaagcttggacaatatcaagataaattaaaagta
tacggcaaaacagacgaaccgtgtgtggtttgtggaacgccaattgaaaaaattaaatta
aacggacgcgggacacatttttgcccgaattgccaaaaatag

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