KEGG   Loa loa (eye worm): LOAG_03556
Entry
LOAG_03556        CDS       T02664                                 
Name
(RefSeq) hypothetical protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
loa  Loa loa (eye worm)
Pathway
loa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LOAG_03556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:loa03400]
    LOAG_03556
DNA repair and recombination proteins [BR:loa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     LOAG_03556
SSDB
Motif
Pfam: MutS_V MutS_I MutS_III MutS_II MutS_IV Ribonuc_2-5A
Other DBs
NCBI-GeneID: 9940947
NCBI-ProteinID: XP_003139141
UniProt: A0A1S0U4F9
AA seq 1204 aa
MAMKKQASLLSFFTRSPNPKSALQEEPIANKTTKIVRRTTPSKISRMQKNGNVESDIRME
DDTKNLHTKRPPDEELSSLKKSCTKRRRVVVSSDSEDNDVEMVNLNKSEENMQQSPRYRS
LKSGLLSHLNSPRRENISSQTSSVYESTSSKPVVSEMTISFINSFRASEQDSSVSSSKLG
CSTDGDVLDESASTACLTTVPDIESVRFPHLDFEFLQPDRIRDADKRLRSHPDYCPRTLY
VPDAFMKKQTPGHRQWWAAKSAYFDTILFFKVGKFYEMYHMDAVIGVENLNLNYMRGSFA
HCGFPEVAYGRFADQLVNRGYKVARVEQTETPTQLESRNKIEKANDKVVRREVCNITTPG
TRTYGVLDGNDEQSTVDVMDTTARYLYAVAERGTESVQYGVCFIDTTVGRFYIGCLSDGS
NRSALRTLFSHYQPAQILYERGRVSASTMTVYNSTVSAVPKEALFPKKEFLTSEDTLKLL
ADDKYFGKLYDKWPVVLLDMIDRDSLIPKCNPAYDACVSALGAIIWYLRRCFVDVDMISM
RRFELYKPMNLTGPLSHDKDEIEVGVHYWRGRRLILDSLTLKHLNIIPPIGSMKKFAPRD
PITTKYTLYNVINKCATPAGKRLLRQWVCAPVCDQEILSSRQDAIEWLSEARLKGFIDKA
RERLCKVPDLERLVQKIHTLGLKYRAEEHPDSRAQMFETMRYNKRKIRDLVRALEGFEHI
QDLRLKFMENFGESQKPVPALLERCFGYRFPDISNDLEHFKNAFNRDKAQEEGIIVPEKG
VIKEYDDTIYNVKECIHELDLYLNVIRRQLHCSNINFFGSGRSRYQLEIPEGIAMNLSHE
FELKSSRKGYKRMVTDELVNLVKNLDEAENQLDILRRDLMRRVFADFGDRSIKWTMVVER
MAVFDVLLSLTLYGQDCGLNMCRPQFIYDSKLPVLEIKSGYHPSLAAIAASGSSFTYIPN
SVLLGGNQPSTILLTGPNMGGKSTLMRQVGVLVVLAQIGSFVPADEMKLSPVDRIFTRMG
AGDRITAGQSTFYVELYETNLILRNATKHSLVIMDELGRGTSTYDGTAIAYAVLLDMATR
LNCRTFFSTHYHGLCKAVQNISSIKAAHMACIVENENAEDPTMENVTFLYTLTDGICPKS
YGFFAAKISGLKTEVIRAAFAASRHLDEGKTRKGRMAELRKLALNEECSTAQLREIIHSM
LVSS
NT seq 3615 nt   +upstreamnt  +downstreamnt
atggctatgaagaagcaagcatctctactttcattttttaccagaagtccaaatccgaaa
agtgcattgcaagaggaacccatcgcaaataaaacgaccaaaatagtgaggcgtaccacc
ccttccaagatttcaagaatgcaaaagaatggtaatgtggaaagtgatatccgaatggaa
gatgacactaaaaacttgcatacgaagcgaccaccagatgaagagctatcatcattaaaa
aagtcatgcacgaaacgtcgccgcgtggtggtttcatcagattcagaagataatgatgtt
gaaatggtaaacttgaacaaaagtgaggaaaacatgcagcaaagtccacgatatagatca
ctgaagagcggtttgctgtcccatttgaattcacctcgtcgtgaaaatatttcttcgcag
acttcatcagtatacgagtccacatcttcaaagcctgttgtgagtgagatgaccatatcg
tttatcaattcattccgcgcttcagaacaagattcatctgtgtcgtcatcaaaactaggt
tgttcaactgatggcgatgtattggatgaaagcgcatctactgcatgtttgactactgtg
cccgatattgaatctgtgcggtttcctcatttagacttcgaatttttacaaccagaccgc
attcgcgatgcagataaacgtttacgtagtcatccagattattgtccgcgtactttatat
gtaccggatgcattcatgaaaaagcaaacgcctggacatcgacagtggtgggcagctaaa
tcggcgtactttgatacaatattgttttttaaagttggaaagttttatgaaatgtatcat
atggatgctgttattggcgtcgaaaatttaaatctcaattacatgaggggtagttttgcg
cattgtggatttccagaagtagcttacggtcgttttgccgatcaactggttaatcgagga
tataaagttgcccgcgtcgaacaaaccgaaacaccaacgcaattggaaagccgaaataaa
atcgaaaaagctaatgacaaagttgtgaggagggaagtgtgcaatattactactccaggt
actcgaacatatggagtacttgatggaaatgatgaacaaagcactgtggatgtgatggac
acaacagcacgttacttgtacgctgtagcagaaaggggtacagaaagtgtacaatatggc
gtctgttttatcgatacaaccgtcggtcgattttacattggctgcctctcagacggcagt
aatcgttctgctctaaggacattattctctcattatcaaccagctcagattttatatgag
cggggacgagtttcggcgtcaacaatgactgtatataatagtaccgtgagtgcggtgccg
aaggaagcgctatttccgaagaaagaatttttaacatccgaagacactttgaaattgctg
gcagacgataaatattttggcaaattatacgataaatggcctgtagtcttactcgacatg
attgatagagacagccttattccaaagtgtaatcctgcgtatgatgcttgtgtttcagct
ttgggagctatcatttggtatttaagaagatgctttgttgatgttgatatgatttcaatg
cgaagatttgagctgtataaacctatgaatcttacgggacctctttcccatgataaggat
gaaatagaagttggtgtacactactggcgcggacgccgtcttattctggatagccttact
ttgaaacatctaaatatcataccgcctattggttctatgaagaaatttgcaccgcgtgac
ccaatcaccacaaaatatacgctttataatgttattaataaatgtgctactcccgcaggt
aaacgtcttcttcgacagtgggtttgcgctcctgtttgcgatcaggagatcttatcttca
cggcaggatgcaatagaatggctttccgaagcgaggttgaagggatttattgataaagcc
agggaacgcttatgcaaagtacctgacctggaacgcttagttcaaaaaatacatacatta
ggattgaaataccgtgcggaagaacaccctgacagccgagcgcagatgtttgaaactatg
cgttataataaacgaaaaattcgagatttggtccgggctttggaaggtttcgaacatatt
caagatctacgtctaaaatttatggaaaattttggcgagagtcaaaaaccagtccctgca
ttattggaacgatgctttggatatcgatttcccgatatctcaaatgatcttgaacatttt
aaaaatgcattcaatcgtgataaagcacaagaagaaggtattattgtgccagaaaaaggt
gtaattaaggaatacgatgatacgatttataacgtaaaggaatgcatccatgaattggat
ttgtatttgaatgtcatcaggaggcaactacattgttcaaacatcaatttctttggaagc
ggacgatcccgttatcagctcgaaataccagaagggatagctatgaatttgagccatgaa
ttcgaacttaaatcctctcgaaagggctacaaacggatggtaacagatgaattggtaaac
ttggttaaaaatctggatgaagctgaaaatcaacttgatattttacgacgtgaccttatg
cgacgcgtattcgctgattttggcgacaggtctatcaaatggacaatggttgttgaacgt
atggctgtattcgatgtgcttctttctttaactctttatggtcaggattgtggtctaaat
atgtgtcgtccgcagtttatttacgatagtaagctgccagtattagaaatcaaatccgga
tatcatccgtcgcttgccgcgatagctgcttcagggagcagtttcacatacataccaaac
agtgttttactgggaggaaatcaaccatcgacaattttgctgacaggtccaaatatgggt
ggaaaatcaacactaatgcgtcaagttggtgtgctggttgtgcttgctcaaataggcagc
tttgtacctgcggatgaaatgaaattgtcaccagttgatcgaatctttacaaggatgggt
gcaggtgatcgaattactgcaggccaatctactttctatgttgaattatatgaaacgaat
ttgattttgcgaaatgcaactaaacattcccttgtcataatggatgaactaggtcgaggg
acaagtacttatgatggcaccgctattgcatatgcagtgctgctggatatggcaaccagg
ctgaactgtcgtacttttttttctacccattatcacggcttatgtaaagcagttcaaaat
attagcagcatcaaagcagcacatatggcttgcattgttgaaaatgaaaatgccgaagat
ccaacgatggaaaatgttacgttcctgtatacgctaacagatggaatatgtccaaaatct
tatggattctttgctgcgaaaatttcgggactcaagacagaggttattcgagctgcattt
gctgcttcacgacatcttgatgaaggaaaaacacgaaagggacgtatggcggaattacga
aaacttgcattgaatgaggaatgtagcacagcacaacttagagaaataattcattcaatg
ttggtttcatcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system