KEGG   Legionella pneumophila Paris (serogroup 1): lpp0320
Entry
lpp0320           CDS       T00209                                 
Symbol
rhlE
Name
(GenBank) hypothetical protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
lpp  Legionella pneumophila Paris (serogroup 1)
Pathway
lpp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    lpp0320 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpp03019]
    lpp0320 (rhlE)
Enzymes [BR:lpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     lpp0320 (rhlE)
Messenger RNA biogenesis [BR:lpp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     lpp0320 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_19 ERCC3_RAD25_C Exotox-A_bind AAA_22
Other DBs
NCBI-ProteinID: CAH11468
Pasteur: lpp0320
Position
complement(364810..366054)
AA seq 414 aa
MSFKQLALIEPLNRAVSELGYTNPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPIL
QKASQQTQTSRNRAKVLILTPTRELAIQAHESIIQYGKYLTLRSAVIYGGVKSHNQIKQL
DSGLEILVATPGRLLDLYQQGAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQ
NLLFSATFTPEVRTLARNILNKAVEIDIAPRNTAVKTIKQTVYSVDGNHKLALLSHLLHK
NNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRTKALADFKSGKVQTLIAT
DIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRAGASGLAVSLVSTEEIKLLLSIEK
LINQKLERIKIKDFEFLHNFSDLVSAKIQKFAPPKAGYKGNISRKSRTAFNKSA
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgagttttaaacaattagcgctgattgagccgctaaacagggcggttagtgagttaggc
tatactaaccctaccagtattcaattaaaagccatcccgctcattttaaatgggcatgat
ttacttggttccgctcaaacaggaacaggaaaaacagcaagctttgtattgcctatcttg
caaaaagccagtcagcaaactcaaaccagccgtaatcgagctaaagtactgattttaacg
cccacacgagaattagccatccaggcccacgagagcataatccaatatggcaaataccta
acactgcgctcggctgtgatttacggaggagtaaaaagccacaaccaaattaaacaatta
gactcaggccttgagatacttgttgcaaccccgggaagattattggatttatatcagcaa
ggtgctgttaaatttgatgagattgacaccctggtactcgatgaggcggatagaatgctg
gatatggggtttattcatgatataaaaaaaattatcaaattattacctttaaaaaggcag
aacctgcttttttcagcaacctttactcctgaggtacgtactttagccagaaatatactg
aataaagcggttgaaattgatatcgcaccgagaaataccgcggtaaaaaccataaaacaa
actgtttattcagtagatggaaaccataagttagcccttctgagtcatttacttcataag
aataactggggacaaactttggttttttctcgaaccaaacatggagccaataaactggtt
aagcaactggccgaatcccaaatatattcagttgctattcatggcaacaaatcgcaggct
caacgaacaaaagccctggctgatttcaagtcaggcaaagtacaaacattaattgcaaca
gacattgcagcacgtggcatagacatcgagaaacttgcctgtgtagtgaattttgacctg
cctcatgtgcctgaggactacgttcatcggattggacgaacaggacgggcaggcgcctct
ggattggctgtatccttggtcagcacagaagaaatcaagctgctgctgtctatagaaaaa
ttaatcaatcaaaaattggagcgcattaaaattaaggattttgagtttttgcataacttt
tcagatttagtctcagccaaaattcaaaaatttgcgccgccaaaagcgggatataagggc
aatatcagcagaaaatccaggacggcttttaataaaagcgcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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