KEGG   Lactococcus raffinolactis: CMV25_03360
Entry
CMV25_03360       CDS       T05231                                 
Name
(GenBank) sugar ABC transporter ATP-binding protein
  KO
K18888  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lrn  Lactococcus raffinolactis
Pathway
lrn02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:lrn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    CMV25_03360
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lrn02000]
    CMV25_03360
Transporters [BR:lrn02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    CMV25_03360
SSDB
Motif
Pfam: ABC_membrane ABC_tran AAA_22 Zeta_toxin MMR_HSR1 SMC_N RsgA_GTPase AAA_29 DUF87 AAA_21 AAA_23 AAA_15 AAA_16 Dynamin_N AAA AAA_18 AAA_24 AAA_33 DO-GTPase2 TsaE
Other DBs
NCBI-ProteinID: ATC60977
Position
complement(692559..694316)
AA seq 585 aa
MTKSKQTASWRFFLPYLLAFRLELILSIIFGLASGITVVLMTYYIGLSVDQMVHRGQVNF
PILRHILVLLVGVLIVTVISQWLIQRLSNRLAYRSVAVLRKDAYEHLNQLPLRYYDQTAH
GNIVSRFTNDMDNISVASAAVFNQLFSGITVVIVALVFMLYLSPILTLVVLISTPIISLV
SWLVARASQQDFVSQQQIIGDISGYITEMIGNQKTVKAFQRETANQAQFEDLNQDLYVKG
QKAQFSSALTNPLSRFVDHLAYLSVGCVGGLMALNGSTAVTIGVISSFTIYASQFSKPFI
EISGITTQIQTAFAGLRRTQELMDQPIETQDAPDAHVLTHAKGDIDFQDVSFGYNPGQAL
ITDFSLKVAPGEMIAIVGKTGAGKSTLINLLMRFYDVDKGAILIDGTDIRDMTRDSLRQS
FGMVLQETWLFGSSLRANLCYGREDATDEEIYTALKEAHMYDFVMRLPDKLETQVGAHAL
KISEGQRQLLTIARTMISQPDMLILDEATSSVDTLTEQKISQAFLKMMTGRTSFVIAHRL
STIKNADKILVLNQGQIVEIGSHDQLMAQQGYYYQLQQAQFAKSN
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgactaaatcaaaacaaacagcctcatggcgtttcttcttaccttacttacttgccttt
cgcctagagctcattttatctatcatttttggcttagccagtgggatcaccgtcgttttg
atgacttattatatcggccttagcgtcgatcagatggtccatcgtggacaagttaatttt
ccgattttgagacatatcttagtcttgctcgtcggtgtcttaatcgtaacagtcatcagc
caatggctcatccagcgcctcagtaatcgcctggcctatcggtcggttgctgtcctgcga
aaggatgcttatgaacatctgaaccagttaccactacgctattatgatcaaaccgctcat
ggcaatatcgtcagccgtttcacgaatgatatggataatatctcagtcgcaagtgctgcc
gtctttaatcaactcttctcagggatcaccgtggtcattgtggccttagtctttatgctc
tatctcagtccgattttgaccttggttgtcttgatttcaacaccgattatttccttggtc
tcttggctcgttgcgcgggcatcacagcaagactttgtcagtcaacaacagattatcgga
gacatttcgggttatatcacggaaatgattggcaaccagaaaacggttaaggcttttcaa
cgagaaacagccaatcaagcccaatttgaggacttgaaccaagacctctatgtcaaaggt
cagaaagcacagttttcttctgctttgaccaatcccctgtcacgttttgtagaccacttg
gcctatctgtcagtgggctgtgtcggtggtctcatggcgctcaacggctcaaccgcagtc
acgattggtgtcatctctagttttaccatctatgccagtcagttttctaagcctttcatc
gagatctcagggattacgacacagattcagactgcatttgctggcttgagacggactcag
gaactcatggatcagccgattgaaacacaggacgctcccgatgcgcatgtcttaacgcac
gccaagggtgacattgattttcaagatgttagctttggttataatcctggtcaagctttg
attactgacttctcactcaaggtagcaccgggtgagatgatcgctattgtcggaaaaaca
ggggccggtaaatcgacgttgatcaaccttttgatgcgtttttacgatgtggataagggt
gcgattttaatagatggaactgatattcgtgacatgacgcgcgatagcttgcgccaaagt
tttggcatggttttacaagaaacctggttatttggtagttcactgcgtgccaatctctgc
tatggtcgtgaagatgcgacagatgaagaaatctacaccgccttgaaagaagcacacatg
tacgacttcgtcatgcgtttgccagataagttagagacacaagttggggcccacgctctc
aagatttctgaaggtcagcgtcagcttttaaccattgccagaaccatgatcagccaacca
gatatgctgattttggacgaagcgacaagttccgtggatactttgacggagcaaaagatt
tcgcaggctttcttaaagatgatgacgggacgcaccagttttgtcattgcccaccgcctg
tcaacgattaaaaatgccgacaagattttagtcctcaatcaaggtcaaattgtcgaaatt
ggcagtcacgatcaactgatggcgcaacagggctactactaccagttgcaacaagcccag
ttcgccaagtcaaattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

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