KEGG   Luteibacter rhizovicinus DSM 16549: BJI69_13265
Entry
BJI69_13265       CDS       T04563                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
lrz  Luteibacter rhizovicinus DSM 16549
Pathway
lrz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lrz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BJI69_13265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrz03400]
    BJI69_13265
Enzymes [BR:lrz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BJI69_13265
DNA repair and recombination proteins [BR:lrz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BJI69_13265
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_11 AAA_25 AAA_12 TPIP1
Other DBs
NCBI-ProteinID: APG04767
UniProt: A0A0G9HFM9
Position
2931122..2934757
AA seq 1211 aa
MEPLRPLSMPLSGIRLIEASAGTGKTWTIAALYVRAVLGQGVAQPLLPPNILVVTFTEAA
TQELRERIRARLVDTARAFRAGESPDAFLAELLASYPASAHAACARRVEQAAQWMDEAAI
FTIHGWSQRMLSQHAFGSGHAFVQTLEPDESELLADCVRDYWRQAFYPLDARQVAAVLAE
WKTPDALIQTLRPLLSGGETTLRVNGQALDKADVGALFTALRAWEDEDASRLAAAREAWM
GDVERIETLLRDAVRTKALKNNIHQPASLERNLAGVRHWLETGEAGAVDVGRYGSARLEG
ATSKGNSRPEHPAFGAVGHWSEWQAGKPAIRFAILADAVERVRERFAAQKRRRAQIGFDD
LLSRLDRALVSASGVELAETIRRQYPLALIDEFQDTDPLQYRIFRAVYAANPDVGLLLIG
DPKQAIYAFRGADIHTYLSARGEAEAPHYSLDTNHRSSAGMVAAVNAMFARAEGHPTGAF
HFAGQGLPFHSVQARGRAERFIVDDDDQPALQIWLLDDEGPVGVRTYREQMAEACATEIV
RLLEAAKQGRTGFAQGGSVTALKPADMAVLVRSHNEASEVRAALSARRVRSVFLSDRDSV
LESIEAHDVLLWLRAVAEPSSDTAMRAALATRTLYLGYGELEQLNVDERHWERRGQQLFE
LRETWRRAGVLAMLHRFLHIFALPARLLGQAGGERALTNLLHLAELLQQAASTIEGEQAL
IRHLAERIDDAASHTGEDQIVRLESDDDLVKVVTIHKSKGLEYPLVFLPFVCASGGTRSG
QGYRYHDGSGAQLELLSSGHEAAGDSVREAKDAAERAALQEDLRLLYVAMTRARHATWLG
VAPVCYNAAKKPQVHRSAFGYLLSGGQEIDNGAIEGLLRAMAQGEPAISIDYMPAPDERI
YVAPMRDERPLPAREARLAKAEPWWIASYSALRYADSDVAAPETASDDVIVEYAGEVAAA
SADAATIHAFERGAEAGTFLHDLLEWIAEEGFAAIAADPVRLRDTVARRCERRGWEASID
LLTNWLLVLLRTSLPLPDGGSFALDSLDDASRYRAELEFLFEARRVDTLALDRIVREHTL
GGAPRPALTADRVNGMLKGFIDLIVEHGGRWYVADYKSNWLGVDELAYTPAAMRHSILDS
RYELQYALYLLALHRQLRSRLGDAYDYDTHVGGAIYIYLRGVDGNGHGVHVERPTRAMID
ALDALFEGVVA
NT seq 3636 nt   +upstreamnt  +downstreamnt
atggaaccgttgcggccgctgtccatgcccttgtccggtattcgcctgatcgaagcgagc
gcgggtacgggcaagacctggacgatcgcggcgctctacgtgcgtgccgtgctcggccag
ggcgtggcgcagcctttgctgccgccgaacatcctcgtggtgacctttaccgaggcggcg
acgcaggaattgcgcgagcgaattcgcgcgcgcctggtcgacacagcgcgcgcgtttcgt
gcgggcgagtcgcccgatgccttccttgccgagttgctggcgtcgtatccggcgtcggct
catgcagcgtgcgcgcgccgtgtcgagcaggcggcacagtggatggacgaggccgccatc
ttcacgattcacggctggagccaacgcatgctgagccagcacgcgttcggtagtggccat
gccttcgtacagacgctggagcccgacgaaagcgagctgctggccgattgcgtgcgcgac
tactggcgccaggcgttctatccactggacgcgcgccaggtggcggccgtgctggcggag
tggaaaacgccggacgcgttgatccagacacttcgaccgcttctgtcgggcggcgagacg
accttgcgtgtcaatggccaggccctggacaaagccgatgtcggcgctctgtttaccgcc
ttgcgcgcctgggaggacgaagacgccagccggctggccgccgcacgcgaggcgtggatg
ggtgacgtcgaacggatcgagaccctgctgcgcgatgccgtgcgtaccaaggcgctgaag
aacaatatccaccagcccgcgtcactcgagcgcaatctggcaggcgtccgtcattggctc
gaaaccggcgaagcaggtgctgtcgatgtcggtcgttatgggtccgcgcgcctggaaggg
gcgacgagcaagggcaatagccggcccgagcaccccgccttcggggcggtcgggcattgg
agcgagtggcaggcggggaagcccgcgattcggttcgcgatcctcgccgatgccgtcgag
cgcgtgcgcgaacgcttcgccgcgcagaagcgccggcgtgcccagatcggcttcgacgac
ctgctgtcccggctcgaccgggcgctggtgtcggcctcgggcgtcgagctcgcggaaacc
atccggcgacagtatccactggcgcttatcgacgaattccaggataccgatccactccag
taccggattttccgcgcggtctacgccgcgaatccggacgtgggtctattgctgatcggt
gatcctaagcaggcgatctatgcgtttcgcggcgcggatatccatacgtatctttccgcg
cgtggcgaggccgaggcaccgcactacagcctggataccaatcatcggtccagtgcgggc
atggtcgccgccgtcaacgcgatgttcgcccgcgccgaggggcatccgaccggcgccttc
cattttgccggccagggattgcccttccatagcgtccaggcgcgcggaagggccgagcgc
ttcatcgtcgacgatgacgaccagcccgccttgcagatctggctgctcgacgacgagggg
ccggtcggcgtgcgcacgtaccgcgagcagatggcagaggcctgcgcgacggagatcgtt
cgcctgctcgaagcggcgaaacaaggacggacgggattcgcgcagggcggctcggtcacc
gcgctgaagcccgccgatatggcagtcctcgtccgcagccacaacgaagcgtcggaagtc
cgtgcggcgctgtcggcccgtcgcgtccgcagtgtcttcttgtccgatcgggactcggtg
ctggaaagtatcgaggcgcacgacgtgctgctctggctgcgcgccgttgccgagccgtcg
tcggataccgcgatgcgggcggcgctcgcgacgcgcacgctctatctgggttatggcgaa
ctcgagcagctgaatgtcgacgagcgccactgggagcgacgcggccagcaactgttcgaa
ctgcgtgaaacctggcgacgtgccggcgtactggcaatgctgcatcgcttcctgcatatc
ttcgcgcttccggcgcgcctgcttgggcaggccggtggcgaacgggccttgaccaacctc
ctgcatctcgccgaattgcttcagcaggcagcctcgaccattgagggcgaacaggccttg
atccgtcatcttgccgagcgcatcgacgatgcggccagccacacgggcgaggatcagatc
gtccgcctggagagtgacgatgacctggtcaaggtcgtgacgattcacaagtccaagggc
ctggagtacccgctggtgttcctgcccttcgtctgcgcgagcggcgggacgcgatcgggg
cagggttatcggtatcacgacggcagcggcgcgcaactcgagctgctttcgtcaggccac
gaggcggctggcgactccgtgcgcgaggcgaaggacgccgccgaacgtgcggccttgcag
gaggatctgcgcctgctctacgtggcgatgacgcgtgcgcgccatgccacctggctaggc
gtggcgccggtttgctacaacgccgcgaagaagccgcaggtccaccgctccgccttcggg
tatctgctcagcggcggccaggaaatcgacaacggtgcgatcgaaggtctgctgcgcgcc
atggcgcagggcgagccggcgatcagcatcgactatatgccggcgcccgacgagcgcatc
tacgtagcgcccatgcgcgacgagcgacccctgccggcgcgcgaagcccgcctggcgaag
gccgagccgtggtggatcgcgagctacagcgccttacgctatgccgatagcgatgtcgcc
gcgcccgagacggcgtcggacgatgtgatcgtcgagtacgccggtgaagtagcggcggca
tccgccgatgccgcgaccatccacgctttcgagcgcggcgcggaggccggcaccttcctg
cacgatctgctcgaatggatcgccgaggaaggctttgccgcgatcgccgccgacccggta
cggctgcgcgacaccgtcgcccggcgttgcgaacgacgcggttgggaagcatccatcgat
ctgctgacgaactggctgctcgtactgttgcgcacgtcgctgccgctgcctgacggcggt
tcgttcgcgctcgattcgctggatgatgcgtctcgctatcgtgctgagctggagttcctt
ttcgaggcgcgccgcgtggataccctggcgctcgaccgaatcgtccgcgagcacacgctc
ggcggagcgccgcgcccggcgctgaccgcggatcgtgtcaacggcatgctcaagggtttc
atcgatctgatcgtcgagcacggtggccgatggtacgtcgccgactacaagtccaactgg
ctcggcgtcgacgaactggcctatacgcccgctgcgatgcggcactcgattctcgattcc
cgttacgaacttcagtacgccctgtatctcctcgccctgcatcggcagctgcgctcgcga
ctgggcgatgcctacgactacgacacgcacgtgggtggcgcgatctacatctacctgcgt
ggtgtggatggaaacgggcatggcgtgcatgtcgagcgcccgacacgagcgatgatcgac
gcgctcgatgcgcttttcgaaggagtggtggcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (33)   

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