KEGG   Latilactobacillus sakei subsp. sakei: LCA_0794
Entry
LCA_0794          CDS       T00299                                 
Symbol
trmU
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
lsa  Latilactobacillus sakei subsp. sakei
Pathway
lsa04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:lsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    LCA_0794 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsa03016]
    LCA_0794 (trmU)
Enzymes [BR:lsa01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     LCA_0794 (trmU)
Transfer RNA biogenesis [BR:lsa03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    LCA_0794 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase QueC ThiI Arginosuc_synth Asn_synthase ATP_bind_3
Other DBs
NCBI-ProteinID: CAI55098
UniProt: Q38XI3
Position
785551..786690
AA seq 379 aa
MVDHSNTRVVVGMSGGVDSSVTALLLKQQGYDVIGVFMKNWDDTDENGVCTATEDYEDVA
KVASKIGIPYYSVNFEKEYWDRVFEYFLDEYKHGRTPNPDVMCNKEVKFKAFLDYAMELD
ADFIAMGHYAQIERDENGIAHMLRGGDSNKDQTYFLSALSQDQLQKSMFPIGHMQKSEVR
RLAEEAGLATAKKKDSTGICFIGERNFKQFLGEYLPAQPGKMMTVDGLEKGTHDGLMYYT
IGQRSGLGIGGGGESNDPWFVVGKDLEQNILYVGQGYHNELLYADQLDASKMTWITPVDH
GTDFHCTAKFRYRQQDVGITVHMTSETTATVVFDAPVRAITPGQAVVFYDGAECLGGGTI
DVAYKVATDDADKQVLQYV
NT seq 1140 nt   +upstreamnt  +downstreamnt
gtggttgaccacagtaatacacgagtcgtcgttggtatgagcggcggagtggactcatca
gtaacagccttattgttaaagcaacaaggttatgacgttattggtgttttcatgaaaaat
tgggatgatacggatgaaaatggtgtctgtaccgcaacggaagattatgaggatgttgcc
aaggttgcttctaaaattggcattccttattattccgttaacttcgaaaaggaatactgg
gaccgcgtgttcgaatatttcttagacgaatataagcacggtagaacacctaatcctgat
gttatgtgtaacaaagaagtgaaattcaaggctttcttagattacgcaatggaacttgat
gctgactttatcgcaatgggccactatgctcagatcgaacgcgatgaaaacggcattgcc
cacatgttgcgtggcggtgatagcaataaagatcaaacatacttcttgagtgctctttct
caagatcaattacaaaaatcaatgttcccaatcggtcacatgcaaaaatcagaagtgcgt
cgtttagctgaagaagctggcttagcaactgctaagaagaaggactcaactgggatttgt
ttcatcggcgaacggaactttaagcaattcttaggcgaatacttaccagcacaaccaggt
aagatgatgactgtcgatggtcttgaaaaaggcacacatgatggtttgatgtactacaca
atcggtcaacgttctggtcttgggatcggtggcggtggcgaatcaaacgacccatggttt
gttgtcggcaaagacttagagcagaatattctgtatgttggccaaggctaccataacgag
ttactctatgctgaccaattggatgcaagtaagatgacttggatcacaccagttgatcac
ggcacagatttccattgcacagcgaagttccgttatcgtcaacaagatgttggcataaca
gttcacatgacttcagagacaactgctacagttgtcttcgatgcgccagtgcgcgctatt
acacccggacaagctgttgttttctacgacggcgcagaatgtttaggtggcggcacaatc
gacgtggcttacaaagtcgctaccgatgatgctgacaagcaagttttacaatacgtctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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