KEGG   Lysobacter soli: GOY17_05410
Entry
GOY17_05410       CDS       T06337                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
lsol  Lysobacter soli
Pathway
lsol03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lsol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GOY17_05410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsol03000]
    GOY17_05410
   03400 DNA repair and recombination proteins [BR:lsol03400]
    GOY17_05410
Enzymes [BR:lsol01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     GOY17_05410
Transcription factors [BR:lsol03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    GOY17_05410
DNA repair and recombination proteins [BR:lsol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GOY17_05410
SSDB
Motif
Pfam: AlkA_N HTH_18 Ada_Zn_binding HhH-GPD HTH_AraC RecR_HhH
Other DBs
NCBI-ProteinID: QGW64403
UniProt: A0A6I6GRN0
Position
complement(1162697..1164280)
AA seq 527 aa
MSEPAHIHADTLPAFHVCEQARRTRDPRFDGLFFTAVLSTRIYCRPVCPAVTARRVVYFR
HAAAAEAAGYRPCLRCRPELSPDDGSWRRGDAAIARALKLIDDGALAEQPLAALAERVGI
GERQLRRLFVERVGVAPMGVHGTRRLLFAKQLLTETDLPITQIALASGFASLRRFNDAFR
TAYRMAPRDLRKGRSEAREAGDVLTLRLGYRPPYDFMAMLDFLRGRALPGVEFVDDASYA
RVIGPVDRPGWLRVSAWPDDRNAGAHALKLELHGAASSKLLDIVQRLRRMFDLDADPQAI
ADTLSKDARFKPLLAQRPGLRLPSGWDGFEIAVRAIIGQQVSVAAARTLASRLAQKYGQP
LPQPFADARVADALAHLFPTPEKLVDADLESIGLIRSRAQTVRGVAQALLDGRVDFRPER
TLDDFVSRWVALPGIGPWTAQYIALRALGHPDAFPVEDLVLQKALPADGTRMAPKALAAR
AEAWRPWRGYAVIHLWRDSMPVPVAKAAKPTRARRGIARTTGADATA
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgtccgagcccgcccacatccacgccgacaccctgcccgccttccatgtgtgcgagcag
gcccgtcgcacgcgcgatccgcgcttcgacggcctgttcttcacggcggtgttgagcacg
cgcatctactgccgcccggtgtgcccggcggtgacggccaggcgcgtggtgtatttccgc
cacgccgcggcggccgaagcggcgggctaccggccgtgcctgcgctgccggccggagctg
tcgcccgacgacggcagctggcggcgcggcgacgcggccatcgcgcgcgcgttgaagctg
atcgacgacggtgcgctcgccgagcagccgttggcagcgctggccgagcgcgtcggcatc
ggcgaacgccagctgcgccgcctcttcgtcgaacgcgtgggcgtcgcgccgatgggcgtg
cacggcacgcgccggttgctgttcgcaaaacagttgctgaccgaaaccgacctgccgatc
acccagatcgcgctcgcatcgggcttcgccagtcttcgccgtttcaacgatgcattccgc
acggcgtatcgcatggcgccacgcgaccttcgcaaggggcgaagcgaggcgcgcgaggcc
ggcgacgtgctcacgctgcgactgggctatcgcccgccgtacgacttcatggcgatgctc
gatttcctgcgcggtcgcgccctgcccggcgtcgagttcgtcgacgatgcgagctacgca
cgcgtgatcggccccgtcgatcgccccggctggttgcgcgtcagcgcatggccggacgac
aggaacgccggcgcgcacgcgctgaagctcgaactgcacggcgccgcctcgtcgaagctg
ctggacatcgtgcagcgcctgcgccgcatgttcgacctggacgccgatccgcaggcgatc
gcggacacgttgtcgaaggacgcgcgcttcaagcccttgctcgcgcaacgccccggcctg
cgcctgcccagcggatgggacggcttcgagatcgcggtgcgcgcgatcatcggccagcag
gtgagcgtcgccgctgcacgcaccctcgcctcgcgcctggcgcagaagtacggacagccg
ctgccgcagccgttcgcggacgcgcgggttgcggacgcgctcgcgcatctgttcccgacg
cctgaaaaacttgtcgatgcagacctggaatccatcggcctgatccgctcgcgtgcgcag
accgtgcgtggcgttgcacaggcgctgctcgatggtcgcgtggatttccggccggaacgc
acgctggacgacttcgtgtcgcgctgggtcgcgttgcccggcatcgggccgtggacggcg
cagtacatcgcgctgcgcgcgctcgggcatcccgatgcgtttcccgtcgaagatttggta
ttgcagaaggcgcttcccgccgacggcacgcgcatggcgccgaaagcgcttgccgcgcgc
gccgaagcgtggcgaccgtggcgcggctatgcggtgatccacctgtggcgcgattcgatg
ccggtgcccgtcgcgaaggccgcgaagccgacgcgcgccaggcgcggaatcgcgcgcaca
accggcgcggacgccaccgcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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