KEGG T05897: 110484562

Lonchura striata domestica (Bengalese finch): 110484562

Entry

110484562         CDS       T05897

Name

(RefSeq) sodium channel protein type 5 subunit alpha

K04838

voltage-gated sodium channel type V alpha

Organism

lsr Lonchura striata domestica (Bengalese finch)

Pathway

lsr04261

Adrenergic signaling in cardiomyocytes

Brite

KEGG Orthology (KO) [BR:lsr00001]
09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    110484562
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lsr04040]
    110484562
Ion channels [BR:lsr04040]
Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   110484562

SSDB

Motif

Pfam:

Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel GPHH IQ

Other DBs

NCBI-GeneID:

110484562

NCBI-ProteinID:

XP_021411000

Position

2:5541062..5755370

AA seq 2028 aa
MADFLLPPGTNSFHRFTPESLAAIEKRIAEKLARNAKQEYREQLGEEEKPQPQFDLQACK
KLPDIYGTVSPELIGEPLEDIDPFYNDRKTFIVLNKGKTIFRFSATPALYILSPFHPIRR
AAIKILVHSLFSMFIMCTILTNCVFMAQSETPSWNKYVEYTFTGIYTFESLIKILARGFC
MTEFTFLRDPWNWLDFSVIVMAYITEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRHKCVRDYTMFNFTNGSLYLDGRTWN
NSEEFLSDPVNYFIKNGTEDVLLCGNSTDAGTCPEGYICLKAGENPDHGYTSFDTFGWAF
LSLFRLMTQDYWERLYQQTLRSAGKIYMLFFMLVIFLGSFYLINLILAVVAMAYEEQNQA
TIAETEEKERKFREAMEMLKKEQEALAAKGIDSMSLSSLEMSPKSAKERRNKRKKKKSLG
ADEYGEDQRNPKSSDYDDGQRRMTLLGISYGPSANLVKRRTSHGSVFSFRLRGRDTCSET
DFADDEISIAGENESHRGSLLIPRSGRRPSVQSQVSHSSHPTTPNYTQTGKRNSSVDCNG
VVSLIGGGTGALNPDPTSPAGLLLPPVIMEKPGTGNLTSPSDEASKKQLLMPHRPSVDHS
DEPFQRQRAVSAVSIITSALEELEESHQKCPPCWNHFAVKFLIWDCCPLWLLIKKFVKFV
VMDPFTDLTITLCIVLNTLFMALEHYKMTKEFEHMLYIGNLVFTGIFTAEMIFKVIALDP
YYYFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIG
NSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYLDNVKKISTTGNLPRWHMNDFFHSFLII
FRILCGEWIETMWDCMEVAGQPLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLSAPD
EDGEMNNLQLAFARINRGLQYAKKAAWNFCCHVLRHPKTTAEKKAMMKLAAQNPGALNNC
VNSHAAAELGKDGENHKESHAEDGGAKNGEKHPAITDEDFMTNPDLSICVPIAVGESDIE
EEDEEQSTFTEMEQQEKQLQLRGQRCQSPGVRSQNSEIYEELSELHVDKQLKAEPPPPVG
KKELDEISLSEGSTVDLTNPAELLEQIPEFAEELMEPEDCFPEVCVRFFPCCSVDITKFP
GKIWWRLRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLEYADKVFT
YIFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLISLVASTLGYSEMGPIKSLRTLRA
LRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCINKT
EGDMPLDSKIINNMSDCILYNVSGTFYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYA
AVDSRECEEQPEWECNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDVVSKQAFDVSIMILICLNMVTMMV
ETDDQSQEKVNILHKINMLFVAIFTGECIFKMLALRHYYFTNGWNIFDFVVVILSIVGTV
LSDIIQKYFFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMANFAYVKKEYGIDDMFNFQTFANSMLCLFQITTSAGWDGLLNPILNTGPPY
CDPNLPNANGSKGDCGSPAVGILFFVTYIIISFLIVVNMYIAIILENFSVATEESTEPLS
EDDFDMFYEIWEKFDPEATQFIEYSALSDFADALSEPLRIAKPNKIKLIAMDLPMVSGDR
IHCLDILFAFTKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKQEEVSAIV
IQRAYRRHLFRRSMKQASYLYRHRTLESSILEDDAPEKEGLIAFMMNENYGRPIDKSETL
SSTSFPPSYDSVTRGTSENLQLKITDVSKSDEAIDCLLSPDKDKESIV

NT seq 6087 nt +upstreamnt +downstreamnt
atggctgacttcttgttaccaccgggtactaacagcttccaccggttcacgcccgagtcc
ttggctgccatcgagaagcgaattgcagagaagctcgcaaggaatgccaagcaggagtac
agagagcagctgggcgaggaagagaaacctcagcctcagtttgacttgcaagcttgcaag
aagctgcctgatatctatgggactgtttctccagagctcattggggagcccttggaggac
attgaccctttctacaacgatcgtaagacatttatagtactgaacaaagggaagacaatc
tttcgatttagtgccactcctgccttgtatatacttagtcctttccatccaatcagaaga
gcagcaattaaaattttggtacattcattgttcagtatgtttattatgtgcactatttta
actaattgtgtgttcatggcacaatcagagactccgtcatggaataaatatgttgagtac
actttcactggcatttacacttttgagtcattgataaaaatattggcgagaggattttgc
atgacagaattcaccttccttcgggatccatggaactggctggatttcagtgttattgtt
atggcatacataactgaatttgtggacctgggcaatgtctcagccttgcgaacgttcaga
gtactgcgggcgctgaaaacaatctcagtcatttcaggactgaagaccattgtaggggca
cttatccagtctgttaagaaacttgcagatgtgatgatcctgaccgttttctgcttgagt
gtctttgccctcataggcctccagctcttcatgggcaacctgagacacaaatgtgtcagg
gattacaccatgtttaacttcaccaatggctccttgtacttggatggtaggacctggaac
aactcagaggaatttcttagtgatccagtgaactatttcattaaaaacggtacagaagat
gtgttactgtgtggcaacagcactgatgctggcacgtgccctgagggatatatatgtctg
aaggctggggaaaatcctgaccatggttacacaagctttgatacttttggctgggccttt
ctctccttgttccgtcttatgactcaggattactgggaacgtctttaccaacagactctc
agatctgctgggaagatctacatgctttttttcatgctggtcatctttctgggctcattt
tacctgatcaacctgattctggctgttgtggccatggcatatgaggagcagaaccaagcc
acgattgctgaaacagaggagaaggaaagaaagttccgggaagccatggagatgttgaag
aaagagcaggaggcactagcagctaaaggaattgattcaatgtcactcagctcattggaa
atgtcacctaaaagtgcaaaagaaagaagaaataagagaaagaaaaagaaatctttgggg
gcagatgaatatggagaggaccaaaggaatcccaaatcatctgactatgatgatggtcaa
aggaggatgactctccttggcattagttatggtcccagtgcaaacttggtgaagcgcaga
accagccacggaagcgttttcagtttccgactccgtggcagagacacttgctccgagaca
gattttgccgatgatgagatcagcatcgctggggaaaatgaaagccaccggggctctctc
ttaattccaagatctgggaggcgtccaagcgtgcaaagtcaagtgagccatagttctcac
cctactactcccaactacacccagacgggcaaaaggaacagctcagtggattgcaatggt
gtggtttccctgataggaggaggcaccggggcactcaacccagaccctacttctcctgca
gggttactgctccccccagttattatggaaaagcctgggacaggcaacctgacctccccc
tcggacgaggcaagcaagaaacagcttttaatgccccaccggccctcagtggaccactca
gatgagccctttcagaggcagagggcagtgagtgctgtcagcatcatcaccagtgccctg
gaagagcttgaggaatcgcaccagaaatgtcctccctgctggaaccactttgctgttaaa
ttcctcatttgggattgctgcccactttggcttttaatcaagaaatttgtcaagtttgtg
gtaatggacccatttaccgacctcaccatcaccctgtgcattgtgctgaacacgctcttc
atggccctggagcattacaagatgaccaaggagtttgagcacatgctgtacattggcaat
ttggtcttcactgggatttttacagcagaaatgatcttcaaagtaattgcccttgacccc
tactactatttccaacagggctggaatatttttgacagcataattgttattctaagcctg
atggaactgggtttgtccagcatgggaaacctgtctgttttacgctcctttcgactgctg
cgagtcttcaagttggcaaagtcctggcccaccttaaatactctcattaaaatcattggt
aattcagtgggtgccctcggtaacctcaccctcgtgctggccatcatcgtctttattttt
gccgtggtaggaatgcagctttttgggaaaagctacttggacaatgtgaagaagataagc
acgactggcaatctgccacggtggcacatgaacgacttcttccactccttcctcatcatc
ttccgaattttgtgcggagagtggatcgagaccatgtgggactgtatggaagtggctggg
cagccgctgtgccttctcgtcttcttgctggtcatggtgataggaaacctggtggtgctc
aacctgttccttgccttgctgctgagctccttcagcgccgacaacctgtcagccccggac
gaggacggggagatgaacaacctgcagctcgctttcgcccgcatcaacaggggcctgcag
tacgccaaaaaagccgcctggaacttctgctgccacgtcctgcggcaccccaagaccaca
gctgagaagaaggccatgatgaaactcgctgcccagaacccaggagccctcaacaactgc
gtgaacagccacgccgcggccgagctgggcaaggacggggagaaccacaaggagagccac
gctgaggatggaggggctaaaaatggagagaaacacccagcaattacagatgaggatttt
atgaccaatcctgacctgtccatttgtgttcctattgctgtgggtgagtcggatatcgag
gaggaggatgaggagcagagcacctttacagaaatggagcagcaggaaaagcagctgcag
ctgagggggcagcggtgccaaagcccaggagtccggagtcagaactctgagatttatgaa
gagttaagtgagttgcacgtggataagcagttgaaggctgagccaccacctccagtaggg
aaaaaagagcttgatgaaatcagtctttctgaaggcagcacggtggatttgacaaatcct
gcagaactgctggagcagatccctgagtttgctgaggagctgatggagcctgaagattgc
ttccctgaagtctgtgtgcgattcttcccatgctgttcagtggacatcacaaaatttcca
ggcaaaatttggtggaggctgagaaagacctgctacagaatcgtggagcacaactggttt
gaaacattcatcatcttcatgatcctgctgagcagtggagccctggcctttgaagatatt
taccttgaagatcgaaaaaacataaaaaccatgctggaatatgctgacaaggtattcact
tacatctttgtcctggagatgctcctgaagtgggtggcatatggcttcaagaagtatttc
accaatgcctggtgctggctggacttcctcattgtagatgtctctttaatcagtttggtt
gccagcactcttggatactccgagatgggtcccatcaaatccctccggaccctccgtgcc
ctgcggccgctgagagccttgtcacggtttgaggggatgagggtggtggtcaatgccctt
gtgggagccatcccttccatcatgaatgttctgctggtctgcctcatcttctggctcatc
ttcagcatcatgggagtgaacctctttgctgggaagtttgggaagtgcattaataagaca
gaaggagatatgcctttggactctaaaattattaacaacatgagtgactgcatactgtac
aacgtgtcgggcacgttttactggacaaaagttaaagttaacttcgataatgttggtgct
gggtacctggctctgctgcaagtggccacatttaagggctggatggatattatgtatgca
gcagtggattcaagagagtgcgaggagcagcctgaatgggaatgtaatttatacatgtac
ctttactttgtgattttcatcatcttcgggtctttcttcacattgaacctcttcattggt
gtcatcattgacaattttaaccaacaaaagaaaaagttaggtggccaggacatcttcatg
acagaagaacagaaaaaatattataatgcaatgaaaaagctgggatctaagaagcctcaa
aagccaatcccaaggccactgaacaaataccaaggttttattttcgatgtcgtctcaaaa
caagccttcgatgtctccatcatgattctcatctgccttaacatggttaccatgatggtg
gaaacagatgaccaaagtcaagaaaaagtgaacatcctccacaaaatcaacatgctcttt
gttgccatcttcaccggggagtgcatcttcaaaatgctggctctgcgacactactacttc
accaatggctggaacatatttgactttgtggttgtgattctgtccatcgtaggcaccgta
ctttctgacatcatccagaaatatttcttctctcccacactcttcagagtcattcgtttg
gctcggattggccggatcctgagactcatccggggagccaaaggaattcgaactctcctg
tttgccttaatgatgtcccttcctgctctgttcaacattggcctcttgctgtttctggtc
atgttcatttatgccatttttggcatggctaactttgcctatgtgaagaaggagtatggg
attgatgacatgttcaacttccaaacctttgctaacagcatgctctgtctcttccaaatc
accacatcagctggctgggatggtcttctcaaccctattttaaacactggaccaccgtat
tgcgacccaaaccttcccaacgcaaatggttcaaagggagactgcgggagccctgctgta
gggattttattctttgtcacatatatcattatatcatttctcattgttgtaaacatgtat
atagccattattttagagaacttcagtgtagccactgaggaaagtacagagcctctaagc
gaggatgattttgatatgttctatgaaatctgggagaagtttgaccctgaagccactcag
tttattgagtattctgcactttcagactttgcagacgcgctgtcagaacctttgcgcata
gcgaaaccaaacaaaatcaaactcatagcgatggacctgcccatggtcagcggagacagg
atccattgcttggatattttgtttgcttttacaaaaagggtgctaggagaatccggagag
atggatgccctcaaaatacagatggaagagaagttcatggcagccaatccctctaagatc
tcctacgagccgataacaacgacgctcaggcggaaacaagaagaggtctccgccatcgtc
atccagagggcctacaggagacatttgttccggcgctccatgaagcaggcgtcctacttg
tacaggcacagaactttggagagcagcatcctggaggacgatgcgcccgagaaggagggg
ctcattgcgttcatgatgaacgaaaactacggcaggccaatagacaaatcagaaactctg
tcctccacctctttccctccatcctacgacagcgtcaccagaggcacgagtgaaaacctc
cagttgaagataacggacgtgagcaaaagcgatgaggctatagattgtcttctctcaccc
gacaaggataaagaatcaattgtttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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