KEGG   Lactuca sativa (garden lettuce): 111892325
Entry
111892325         CDS       T05352                                 
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3
  KO
K12489  Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111892325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111892325
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111892325
Membrane trafficking [BR:lsv04131]
 Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    111892325
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    111892325
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111892325
SSDB
Motif
Pfam: BAR_3 ArfGap Ank PH Ank_2 Ank_3 Ank_5 Ank_4 BAR PH_11 PH_8 PH_20 PH_13
Other DBs
NCBI-GeneID: 111892325
NCBI-ProteinID: XP_023744171
Position
4:complement(145479051..145485142)
AA seq 820 aa
MQQEAMMYFSKLDDSPMFRQQIQCLEEIAETLRERGSKFYKGCRKYTEGLTEANERDAAF
ASSLESFGGGPDPISMAFGGPDMIKFAVVLREIGTYKESLRSKIEHTLSDRLIRFTNMEL
QDIKEARKRFDKADAVYSQIRDKFLSLRKSTRTEIAAAMEEELYNARMTFEQARFNLVSA
LSSVETKKRFEIVESLGEAMDAHLHYFKQGYELLIQMQPYIQQVLLHAQKARQSYYSEQQ
TLNERVQEYKKHIDVGSRISSNISVGNGDMAQQYPRNSHKVIHAVMQSGAEGKVQNIKQG
YLSKRSSNLRGDWKRRFFVLDNRGMLYYYRKQLARPPGSGVQRGNTAEPGPGILSRWLSS
HYHGGVQDVARHTVNLLTSTIKPDAEQSDLRFCFRIISPMKIYTLQAESSLEQLDWIEKI
NGVIASLLSSQTPEMHLCTSPTSEGSLGGEIPMSQDRKTSAECSSEKDRSSRNMMRACKS
SQQLRYGGRNEKPVDALRKIVGNDKCADCGAPDPDWASLNLGVLICIECSGVHRNLGVHI
SKVRSLELDVKAWEPSVIKLFQSLGNVFANSVWEKMLTVKRSHQADDELSWRSMESDKSG
ESFGKPSCDDHISTKEKFIHAKYSEKRYIQKVKDPSHLMTLEQQLWENVRCNDKKAVYLL
IIICNADVNATYGVSITHSQDLTTVEVDHDHEYECDYLKSYSTDSSSSRSSASIKGTNDP
LTNEALDGCSLLHLASQTADCTMVELLLQHGANINACDSKGQTPLHHGIMRGRLAIVKLL
LTRGADPLAADMEGKTPRQLVSELGIDDIQLLALLRAPKR
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgcagcaggaggcaatgatgtatttctccaaactcgacgattccccaatgttccgtcaa
cagatccagtgtttggaagaaattgcagagacactaagggagagaggttccaaattctac
aaaggctgtcgaaagtacacagaaggcctaacagaagcaaatgaaagggatgctgctttt
gcaagctcccttgaaagttttggtggaggacctgatcctatttctatggcttttggaggt
cctgacatgataaagtttgcagttgttttaagagaaattgggacatataaagaaagtctt
cgatcaaagattgagcatacactaagcgatagattaattcgcttcaccaatatggagcta
caagatatcaaggaagctaggaaacgttttgacaaggctgatgctgtttatagccagata
cgtgacaagtttttatcattgagaaaaagtactcgaacagaaatagctgctgcaatggag
gaggaactttataatgcaagaatgacatttgagcaagctcgcttcaatctggtttctgct
ctttcaagcgtcgaaacaaagaaaagatttgagattgtggaatctcttggtgaggcaatg
gacgcccatcttcattatttcaaacagggttatgagttgttaattcaaatgcagccttac
atccaacaggtattgttacatgcacagaaagccagacaaagctactattcagaacagcaa
acactaaacgaaagggttcaagagtacaagaaacacattgatgtgggaagcagaatatct
tctaatatttctgttggtaatggtgacatggcacaacaatatccaagaaactcccataaa
gtaatacatgcagttatgcagtctggtgcagaggggaaggttcaaaacatcaaacaagga
tacctatcaaaacgctcctcaaatttgagaggagattggaagagaagattctttgtactt
gataaccgagggatgctgtattactatcgcaagcaattagccagacctcctggatctggt
gtacagagaggtaatacagctgagcctgggcctggtatactcagcaggtggctatcttct
cattatcatggtggggtgcaggatgtggcacgccacacagtcaacttgcttacatctaca
ataaagcctgatgctgaacaatcagatttgagattttgtttcaggattatctctccaatg
aagatatacactttacaagcagaaagctcactggaacaattggattggattgaaaaaata
aacggagtaatagcttcactcttaagttcccaaacacctgagatgcatctatgtacaagt
cctacgagtgaaggtagcttaggaggagaaatcccaatgagtcaagataggaagacatct
gcagaatgtagcagtgagaaagataggagttcaagaaacatgatgcgtgcatgtaaaagc
tcacaacaattaagatatggtggaagaaatgaaaaaccagttgatgcattgagaaagata
gttggtaatgataagtgtgctgattgtggtgcacctgatccagactgggcttccttaaat
cttggagttcttatttgcattgagtgttcaggtgttcatcgcaatcttggtgttcatata
tccaaggtaagatctttggaacttgatgtgaaggcatgggaaccttctgtgattaagctg
ttccagtcattagggaatgtatttgccaattcagtatgggagaaaatgttgactgtaaaa
agaagtcatcaggctgatgatgaattatcttggagatccatggagtctgataaatcaggt
gagtcctttggaaaacctagttgtgatgatcatatatccacaaaggaaaagttcattcat
gcaaagtattcagaaaagagatacattcaaaaagtaaaagaccctagtcatctcatgaca
ctggaacaacaattatgggaaaatgtgcgttgtaatgacaagaaagcagtttaccttctt
atcatcatatgcaatgcagatgtgaatgccacttatggtgtttccatcacacactcacaa
gacctaactacagttgaggttgaccatgaccatgaatacgaatgtgactacttaaaaagt
tattctacagatagttcctcctcaagatcttcagcctcaataaaagggactaatgatccc
ttaaccaatgaagccctagatggttgttcccttcttcacttggcttcccaaactgctgac
tgtaccatggtggaactgctgttacaacatggagcaaatatcaatgcttgtgattcaaaa
ggtcaaacgccacttcatcatggtatcatgagaggccgacttgcaatcgtaaagttactt
cttaccaggggagccgatccattagcagcagacatggaaggtaaaacgccacgtcagctt
gtgtcagaattaggaattgatgatatccaactccttgcccttctacgagcaccaaagaga
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (13)   
   Pfam (13)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system