KEGG   Lipotes vexillifer (Yangtze River dolphin): 103075241
Entry
103075241         CDS       T03090                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03030  DNA replication
lve03410  Base excision repair
lve03420  Nucleotide excision repair
lve03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103075241 (RFC2)
   03410 Base excision repair
    103075241 (RFC2)
   03420 Nucleotide excision repair
    103075241 (RFC2)
   03430 Mismatch repair
    103075241 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lve03032]
    103075241 (RFC2)
   03036 Chromosome and associated proteins [BR:lve03036]
    103075241 (RFC2)
   03400 DNA repair and recombination proteins [BR:lve03400]
    103075241 (RFC2)
DNA replication proteins [BR:lve03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103075241 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103075241 (RFC2)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103075241 (RFC2)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103075241 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103075241 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 AAA_24 Viral_helicase1 AAA_11 Rad17 Mg_chelatase RuvB_N AAA_assoc_2 nSTAND3 AAA_19 AAA_5 AAA_18 MipZ AAA_28 AAA_25 AAA_23 AAA_3 AAA_30 ABC_tran NTPase_1 T2SSE MeaB RNA_helicase FtsK_SpoIIIE bpMoxR SLFN-g3_helicase
Other DBs
NCBI-GeneID: 103075241
NCBI-ProteinID: XP_007468830
UniProt: A0A340YBM4
Position
Unknown
AA seq 352 aa
MEAQGSGGGSGECGAQDPDPAPSKAPGSAGQYELPWVEKYRPVKLNEIVGNEDTVSRLEV
FSREGNVPNIIIAGPPGTGKTTSILCLARALLGPAFKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQILARLLSVIEKERVQYTDDGLEAILFTAQGDMRQALNNLQSTFSG
FGFINSENVFKVCDEPHPLLVKEMIQHCVSASIDEAYKILAHLWHLGYSPEDIIGNIFRV
CKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggaggcgcaggggagtggcggtggcagcggcgagtgcggggcccaggaccctgacccg
gcccccagcaaggcccccggcagtgccggccagtacgagctgccgtgggttgaaaaatat
agaccagtaaagctgaatgaaattgtcgggaatgaagacacagtgagcaggctggaggtg
ttttcaagagaagggaatgtgcccaatatcatcattgctggccccccagggaccggcaaa
actaccagcatcctgtgcttggcacgagccctgctgggcccggccttcaaggacgccgtt
ttggagctcaatgcctcaaatgacaggggcattgacgttgtgaggaacaaaatcaaaatg
tttgcccaacagaaagtcacccttcccaaagggcgacacaagatcatcatcctggatgaa
gcagacagcatgactgatggagcccagcaagccttgaggagaaccatggaaatctactcc
aaaacgacccgcttcgctcttgcttgtaatgcttcggataaaatcatagagcccattcag
tcccggtgcgcagtcctccgctacaccaagctgaccgacgcccagattcttgccaggctg
ctgagcgtcatcgagaaggagagggtgcagtacacggacgatggcctggaagccatcctc
ttcaccgcccagggtgacatgaggcaggcattgaacaacttgcagtccaccttctcggga
ttcggcttcatcaacagtgagaatgtgttcaaggtctgtgacgagccccaccccttgctg
gtgaaggagatgatccagcactgtgtgagcgccagtatcgatgaggcctacaagatcctc
gctcacctgtggcatcttggctattccccagaagacatcattggcaacatttttcgagtg
tgtaaaaccttccaaatggcagaatacttgaaactggagtttattaaggaaattggatac
actcatatgaaaatagcggaaggtgtgaactcccttctgcagatggcagggctcctggcc
aggctgtgtcagaagacaatggccccggtggccagttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (31)   
   Pfam (31)   
All databases (54)   

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