KEGG   Lysobacter sp. TY2-98: DWG18_06600
Entry
DWG18_06600       CDS       T05586                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lyt  Lysobacter sp. TY2-98
Pathway
lyt02024  Quorum sensing
lyt03060  Protein export
lyt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lyt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    DWG18_06600
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DWG18_06600
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DWG18_06600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lyt02044]
    DWG18_06600
Enzymes [BR:lyt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     DWG18_06600
Secretion system [BR:lyt02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   DWG18_06600
  Eukaryotic Sec-SRP protein
   DWG18_06600
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 Helicase_RecD CbiA GTP_EFTU cobW AAA_33 AAA_16 AAA_31 APS_kinase ABC_tran YqeC DO-GTPase1 KTI12 AAA_19 AAA_14 AAA_5 Thymidylate_kin AAA ATP_bind_1 ResIII AAA_30 TsaE AAA_28 AAA_24 NACHT F420_ligase AAA_17 nSTAND3 AAA_18 AAA_7 Rad17 NTPase_1 NAD_binding_10
Other DBs
NCBI-ProteinID: AXK71984
UniProt: A0A345ZJQ9
Position
complement(1405489..1406856)
AA seq 455 aa
MFESLSQRLSGTIERLRGRGRLTEENIRESLREVRIALLEADVALPVVQGLIERIKVRAV
GQEVLKSLTPGQALIKVVRDEMSAVMGAQASDLNLNVPAPAVILMAGLQGAGKTTTVGKL
AKHLKEKRKKKVMVVSADVYRPAAIEQLRQLAQQVDVIFFPSDPSQKPEAIVRAAIDDAR
KSYVDVLIVDTAGRLAIDEAMMAEIKTLHGAVNPVETLFVVDSMTGQDAAVTAKAFAEAL
PLTGVVLTKTDGDARGGAALSVRYITGRPIKFMGTGEKPDGLDVFHPDRIASRILDMGDV
LSLVEQVEAQVDKDKAAKLAEKVVKGKKFDLNDMRDQLEQMQNMGGLHGLMDKLPGMGQI
PDSVKNQVTGKEVPRMIAIINSMTKKERRNPGLLNGSRRARIAKGAGLTPADVNKVMKQY
QQMEKMMSKLAGGGMKGLMRGMKGMMGGRGGMPFR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgttcgaatccctctcccagcgtctttccggcacgatcgagcgcctgcgcggccgcggt
cgcctgaccgaggagaacatccgcgagtcgctgcgcgaggtgcgcatcgcgctgctcgag
gcggacgtcgcgctgccggtggtgcagggcctgatcgagcgcatcaaggtgcgcgccgtc
ggccaggaagtgctgaagtcgctgacgcctggccaggcgctgatcaaggtcgtgcgcgac
gagatgtcggcggtgatgggcgcgcaggcgtcggacctcaatctcaacgtgccggcgccg
gcggtcatcctcatggccggcctgcagggcgcgggcaagacaaccactgtcggcaagctt
gccaagcacctcaaggaaaagcgcaagaagaaggtgatggtggtgtcggccgacgtctac
cgtccggccgcgatcgaacagctgcgccagctcgcccagcaggtcgacgtgatcttcttc
ccgtccgacccgtcgcagaagcccgaagccatcgtgcgcgccgcgatcgacgatgcgcgc
aagtcgtatgtcgacgtgctgatcgtcgacaccgcgggccgcctcgccatcgacgaagcg
atgatggcggagatcaagacgctgcacggcgcggtcaatcccgtcgaaacgctgttcgtc
gtcgactcgatgaccggccaggatgccgcggtcaccgcgaaggcgttcgctgaagcgctg
ccgctcaccggcgtcgttctgacgaagacggacggtgacgcacgcggcggtgcggcgctg
tcggtgcgctacatcactggtcgcccgatcaagttcatgggcaccggcgagaagcccgac
ggcctcgacgtgttccatccggatcgaatcgccagccgcatcctcgacatgggcgacgtg
ctgtcgctggtcgagcaggtcgaagcgcaggtcgacaaggacaaggcggcgaagctcgcc
gagaaggtcgtcaagggcaagaagttcgacctcaacgacatgcgcgaccagctcgagcag
atgcagaacatgggcggcctgcacggcctcatggacaagctgccgggcatggggcagatc
ccggattcggtgaagaaccaggtcaccggcaaggaagtgccgcggatgatcgcgatcatc
aattcgatgaccaagaaggagcgtcgcaacccgggcctgctcaacggctcgcgacgcgcg
cgcatcgccaagggcgcggggctgaccccggcggacgtcaacaaggtgatgaagcagtac
cagcagatggaaaagatgatgtccaagctggccggcggcggcatgaaggggctcatgcgc
gggatgaagggaatgatgggcgggcggggcggaatgccgttccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (37)   
   Pfam (37)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system