KEGG   Marinitoga sp. 1137: LN42_03670
Entry
LN42_03670        CDS       T04633                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
marn  Marinitoga sp. 1137
Pathway
marn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:marn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LN42_03670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:marn03400]
    LN42_03670
DNA repair and recombination proteins [BR:marn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LN42_03670
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LN42_03670
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD Kinesin AAA_30 AAA_22 GLYCAM-1 AAA_16
Other DBs
NCBI-ProteinID: APT75589
Position
complement(707512..709485)
AA seq 657 aa
MPDFKLYSKYKPQGDQPEAIDKLVKGIKKGYRFQTLLGVTGSGKTFTMANVIERLNRPTL
ILSPNKILAVQLYREFKEFFPENKVEFFISYYDYYQPEAYIPTRDMYIEKDASINEILQK
MRLSTLKSVLTRRDVIVVSSVSAIYASGNPEDFANINLKIKVGEEYNRRFILESLAKMLY
NRSEDKHTGGNFRFKGDILEIYPPYEDFGIRIEFFDDEVEKIYSFDILNRTKIESFDKIT
IYPASEFVTTEEKIMRATQSIREELEERLKELQKAGKLLEAQRLKQRTLMDIELLETLGH
CKGIENYSRHFDMRKPGEPPWTLLDYFDDDFITFIDETHIAIPQLRAMWAGDHSRKRNLI
EYGFRLPSAFDNRPLKFDEFISKIRQTIFVSATPGSFEFEHSEQVVEQIIRPTGLIDPEV
IVRPTMGQVDDFIAELKKIISRNERAIAVVLTKKDAEMLSDHLNLLGIKATYLHSELDAI
ERAEVIRKLRSGEIDAVIGVNLLREGLDLPEVSLVAIMDSDREGFLRSETTLIQTIGRAA
RNINGKVILYADKITEAMQKAIYETNRRRKIQMYYNEKNNIIPKSIIKELPKNIFEQFME
KTEKPEFIFEVAEGTTPEEYIQLLEAEMFKAASELRYEDAAKYRDEIKRVKKKYRIK
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgccagactttaaattatattcaaaatataaacctcagggtgatcaaccagaagcaata
gataaattagttaaaggaataaaaaaaggatatagatttcaaacgttattaggggtcacc
ggttcaggcaaaacatttaccatggccaatgtaatagagagattaaacaggcctacttta
atattatccccaaataaaatacttgctgttcaattatacagagaatttaaggagtttttc
cctgaaaataaagttgaattctttataagttattacgattattatcagccagaagcatat
ataccaacaagagacatgtatatagaaaaagatgcaagtataaatgaaattcttcaaaaa
atgcgattatccacattaaaatctgtattaaccagaagggatgttatagtggtatccagt
gtttcggctatatatgcatctggaaatcctgaagattttgccaatataaatttaaaaata
aaagtaggagaagaatataatagacgatttattttagaatcacttgcaaaaatgctttat
aatcgctcagaagataaacatacaggcggtaattttagatttaaaggggatatactcgaa
atatatccaccatatgaagattttggaattagaatagaattttttgatgatgaagttgaa
aaaatatactcatttgatatattaaacagaactaagattgaaagttttgataaaattacc
atttatcctgcaagcgaatttgttaccactgaagaaaagataatgagagcaactcagtct
attcgcgaagaactggaagaaagactgaaagaattacaaaaagcaggtaaattacttgaa
gcacaaagattaaaacaaagaacattaatggatatagaattactggaaacattggggcat
tgtaaaggaatagaaaattattcaaggcattttgatatgaggaaacctggagaaccgccc
tggacattacttgattactttgacgatgattttattacatttatagatgaaacgcatata
gctattcctcagcttagagcaatgtgggcaggagatcattccagaaaaagaaatcttata
gaatacggttttagacttccgtcagcatttgacaatagaccgctgaaatttgatgaattt
atatcgaaaattcgccagacaatttttgtttctgcaacaccgggatcatttgaatttgag
cattctgaacaagtagtagaacaaataatcaggcctacaggccttattgatccagaagta
attgttcgtcctacaatgggtcaggtggacgattttattgcagaattaaagaaaataata
tctcgaaatgaaagagcaatagctgttgtattaaccaaaaaagatgcagaaatgctttct
gatcatttaaatttgcttggaataaaagctacctaccttcattctgaattagatgcaata
gaaagagctgaagttattagaaaactaagaagtggtgaaattgatgcggtaataggtgtt
aatcttttaagagaaggtcttgacttaccagaagtttcgctagttgctataatggattct
gatagagaaggttttttacgttcagaaactacattaattcagactataggacgtgcagca
agaaatataaatggaaaggtaatattatatgcagataaaattactgaagcaatgcaaaag
gcaatatatgaaacaaatagaagaagaaagattcagatgtattataatgaaaaaaataat
ataattcctaaaagtattattaaggaattacctaaaaatatttttgaacaattcatggaa
aaaacagaaaaaccggaatttatctttgaagtagcagaaggaacaacaccggaagaatat
attcaattattagaagcagaaatgtttaaagcggcttcagaattaagatatgaagatgct
gcaaaatatagagatgaaataaaaagggtaaagaaaaaatatagaataaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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