KEGG   Palleronia sp. THAF1: FIU81_00630
Entry
FIU81_00630       CDS       T06247                                 
Symbol
hsdR
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
maru  Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:maru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:maru02048]
    FIU81_00630 (hsdR)
Enzymes [BR:maru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     FIU81_00630 (hsdR)
Prokaryotic defense system [BR:maru02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   FIU81_00630 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DEAD HSDR_N Helicase_C DUF4145 PhoH AAA_19 Helicase_C_2
Other DBs
NCBI-ProteinID: QFU07177
UniProt: A0A5P9J2Z9
Position
complement(123861..127205)
AA seq 1114 aa
MTISKNFSHLHEIDAPLAILATHAERYFVDDANTALIKTRQFAERMARVIAESAGADIAG
NDMFSDILRSIRRDDLVPAEILDILHRLRIDGNAAVHGYDGERRMAFEAIKLCHRLGVWL
RASATRQPRLTMPFTPPRLAETDAPDLKEQVAALRSELEQRSAEASRLAEEAEDARGAAL
NAEDRARLAEEERAIFAELAEEAEQRAARPVDRGKAQTFIQAAFESAKDMDFDEADTRLL
VDEQLRQVGWDVDSAKLRYSLGTRPEKNRNMAIAEWPTSSGPADYALFAGRILVGIVEAK
RKRRNVMSAVDVQASRYSHDIQPHESFEFAGGPWDDHKVPFIFATNGRGFYPAMATQSGI
WFRDTRDSSNASRALEGWFTPKGLVERLEVDRRAAEKELEDKPFNFGFDLRPYQKKAIKA
VEKGVSEGQREMLVAMATGTGKTKLAIAMIYRLLEAKRFLRVCFIVDRSALGEQAESAFE
TTRMVGAKTFAEIFGLRGLEDQNIDRDAKIHICTVQSLVKRVLEREPGERPPVDQYDLIL
IDECHRGYLLDREMSEAETTFRDQNDYVSKYRRVVEYFDAVKVGLTATPALHTAQIFGEP
IYRYSYREAVIDGWLIDHDPPHLIKTALSEAGITIKAGETIDVLDPRTGEIDIATLPDQL
DFTVEHFNRRVRAPKFNQVVAEEISRRIDIMSPDAGKTLVFATSDDHADEVVQYLRQAYR
DEGLDIRDDMIQKITGSVDKPGKLILKYKNESDPRIAVTVDLLTTGIDVPAITNLVFLRR
VNSRILYDQMIGRATRKCDGIGKEAFQIYDAVDLYPNLQAMTEMRPVVVDPKVSFETLFD
GFENADDTSHQEEILDQIIVKLSRRVRRMNDEIRQQYCAQAGETPEDTLERFRNGPTPEV
RQWTQDRPGLGKFFDFKGDRGAPPIIPIYTGDDTVTGVTRGYGEGVRPADFIEAFETFVR
DNANKIDALNVVVTRPRDMTRKSLRELRLALDARHFTESALRTAWRDSTNEDIAASIIGF
IRQAALGDPLIPYADRVSAAVRKVASTHDLDDVQRRWLDRIGDEMKSQVVIDRQAFDDPP
FAQQGGYKRLNKIFGGELDAILEEIKNETWEPAA
NT seq 3345 nt   +upstreamnt  +downstreamnt
gtgactatcagtaagaatttcagccatcttcacgagatcgacgcgcctctggcaattttg
gcgacgcatgccgagagatacttcgttgatgatgcgaatacggcgctgatcaagacgcgc
cagttcgcggagcggatggcccgggtgatcgctgagtctgccggtgccgacatcgccggc
aacgacatgttctccgacatactacgaagcatccgtcgcgatgacttggtgcctgccgag
atactggacatccttcatcggctacggattgatggaaacgccgccgttcacgggtatgac
ggcgaacgccggatggcattcgaggcaatcaagctctgccatcgcctcggtgtctggctt
cgtgcctccgcgacccgacagccgcgtctgacgatgccatttactccgccgaggctggcg
gagaccgacgcgcccgacctcaaggagcaggtggcggcactccgatccgagttggagcag
cgctcggccgaagcctcacgtctcgcagaagaggccgaggacgctcgtggcgcagccctg
aatgccgaggacagggcccgtctcgcagaagaggaacgcgcgatcttcgcagagctggcc
gaggaagctgagcaacgcgctgcacgaccggtcgatcgcggcaaagcgcagacgttcatt
caggctgcgttcgagtcggccaaggatatggacttcgacgaggctgacacgcgcctcctc
gttgacgaacaacttcgtcaggttggatgggatgtcgacagtgccaagctgcgatattcc
ttgggcacccgaccggagaagaaccgcaacatggccatcgctgaatggccgacatcttcg
ggcccggcggactacgcgctcttcgctggacgcattctggtcgggatcgtggaagccaag
cgcaagcgcagaaacgtcatgtctgccgtggatgtccaggcgagccgctactcgcacgat
atacagcctcacgagagtttcgagttcgcgggtggcccttgggatgaccacaaggtgccg
ttcatctttgccaccaacggacgtggcttctatccggcgatggccacccagagtgggatc
tggttccgcgacacacgagattcctccaatgcttcgcgcgcgctggaagggtggttcacc
cctaaaggcctcgtcgaacggctcgaggtcgatcgtcgagccgcagagaaggaactggag
gacaagcccttcaacttcggcttcgacctgcgtccctaccagaagaaggcgatcaaggcc
gtagagaagggcgtttccgagggacaacgtgaaatgctggtcgcaatggcaacaggcacc
ggcaagaccaagctggccatcgccatgatctaccgtcttctggaggcgaagcgcttcctc
cgagtctgcttcatcgttgaccgaagtgcactcggagagcaagccgagagcgccttcgag
acgacgcgcatggtcggcgcgaagacgtttgccgagatcttcggcctccgaggtcttgag
gaccagaacatcgaccgggacgccaagatccacatctgcaccgtgcagagcctcgtgaag
cgcgtcctcgagcgcgagcccggcgagcgacctcctgtcgatcagtatgacctgatcctg
atagacgagtgccaccggggctacctactcgaccgagagatgagcgaggccgagacgacg
ttccgggaccagaatgactacgtgtcgaaatatcggcgtgtagtcgagtattttgatgca
gtgaaagtcggacttacagcgacgccggccctgcacaccgcacagatcttcggcgagccg
atatatcgttacagttatcgcgaagccgtcatcgacgggtggctgatcgaccacgatccg
ccacatctgatcaagaccgcgcttagcgaagcaggcatcacgatcaaggcgggcgagacc
atcgacgttctcgacccgcggaccggcgagatcgacattgccactttacccgatcagctg
gacttcaccgtagagcacttcaatcgacgtgtccgggcgccgaagttcaatcaagtcgtc
gcggaggagatctcgcgccggatcgacatcatgtcgcccgatgctggcaagaccctcgtc
ttcgccacctcagacgatcatgccgacgaggtggttcagtatctacgacaggcctaccgg
gatgagggcctcgatatccgtgacgacatgatccagaagatcaccgggtcggtcgacaag
ccgggcaagctgatcctgaaatacaagaacgagtccgatcccaggatcgccgtgacggtc
gatctgctcaccacgggcatagacgttcccgcgattaccaacctggtcttcctacgccgt
gtgaactcccgaatcctctatgatcagatgatcggccgcgcgacccgcaagtgcgacggg
atcggcaaggaggccttccagatctacgacgcggtcgacctctatccgaacctccaggct
atgaccgagatgcggcccgtcgtcgtcgacccgaaagtgtccttcgaaactcttttcgac
ggcttcgagaacgccgatgacacgtcccatcaagaggaaatcctcgaccagatcatcgtc
aagctttcccgcagggtccggcgaatgaacgacgagattcggcagcaatattgtgctcag
gctggcgagacacctgaagatacgttggaacgcttccggaatggaccaacaccagaagtc
cggcagtggactcaagatcggcccgggctggggaagtttttcgacttcaaaggcgaccgc
ggcgccccgccgatcattccgatctacactggcgatgatactgtcaccggggtcacgcgt
ggatatggcgagggagtgcgcccggccgacttcatcgaagccttcgagacgttcgtgcgc
gacaacgcgaacaagatcgacgcgctgaacgtggtcgtcacgcgcccgcgcgacatgacc
cgcaagagcctgcgtgagctacgtctggccctcgatgcccgacacttcacagagagcgcc
ttacgcaccgcgtggcgcgacagcacgaacgaagacattgccgcctccatcatcggcttc
atccgacaggcagccctcggcgatcctctgattccctatgccgaccgtgtcagtgcggcc
gtcagaaaggttgcatcgacccacgatctcgatgatgtccagcgacgctggctcgatcgg
atcggggacgaaatgaagagccaggtcgtcatcgaccgacaggccttcgatgacccgccc
ttcgcacagcagggcggctacaagcgcctaaacaagatcttcgggggcgaactcgacgcc
atcctcgaggagataaaaaatgagacttgggagcccgccgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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