KEGG   Mycobacterium avium subsp. paratuberculosis E93: RE97_04470
Entry
RE97_04470        CDS       T03847                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
mavu  Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:mavu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mavu03016]
    RE97_04470 (truB)
Enzymes [BR:mavu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     RE97_04470 (truB)
Transfer RNA biogenesis [BR:mavu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RE97_04470 (truB)
 Prokaryotic type
    RE97_04470 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 DKCLD PseudoU_synth_2 AlaDh_PNT_C
Other DBs
NCBI-ProteinID: AJK78520
UniProt: A0A7L5MG22
Position
973954..974835
AA seq 293 aa
MSPPGLVVVDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVLGVERATKILGL
LTAAAKSYSATIRLGQATSTDDAEGDVARSVDARHLTSQAIEAAVGGLRGDIHQVPSTVS
AIKVAGKRAYKLVREGQAVELPARPVRIDRFEVRGLRAAGACVDVDVEVDCSSGTYVRAL
ARDLGAALGVGGHLTALRRTRVGRFGLEQAYGLDELAECPRLSYSLDEACLLIFGRRDLS
ADEAEAAGNGRALAAAGIDGVYAACAPDGRVIALLRDEGARTKSVVVLRPATL
NT seq 882 nt   +upstreamnt  +downstreamnt
atgagccctccgggcctggtcgtcgtcgacaagccggcgggaatgaccagtcacgacgtg
gtgggccggtgtcgccggatcttcgcgacccgacgggtggggcacgccgggacgctcgac
ccgatggccaccggcgtgctggtgctcggcgtcgagcgcgccaccaagatcctcggcctg
ctgaccgcggccgccaagtcgtactcggccaccatccggctgggccaggccacctccacc
gacgacgccgagggcgacgtggcgcgcagcgtcgacgcgcggcacctgacgagccaggcg
atcgaggcggcggtgggcgggctgcgcggcgacatccaccaggtgccctcgaccgtcagc
gcgatcaaggtggccggcaagcgggcctacaagctggtccgcgagggccaggccgtcgag
ctgccggcccgcccggtgcgcatcgaccggttcgaggtgcgcggcctgcgcgccgccggt
gcgtgcgtggacgtcgacgtcgaggtggactgctcgtcgggaacctacgttcgggcgctg
gcccgcgacctgggcgcggcgctgggggtgggcgggcatctgacggcgctgcggcgcacc
cgggtcgggcgcttcgggctcgagcaggcgtatgggctcgacgagctggccgagtgcccc
cggctgagctacagcctggacgaggcctgcctgctcatcttcgggcgccgcgatttgtcc
gccgacgaggccgaggccgccggcaacggccgggccctggcggcggccgggatcgacgga
gtgtatgccgcctgcgcccccgacggccgggtgatcgcgctgctgcgcgacgagggcgcg
cggaccaagtccgtggtggttttgcgcccggcgacgctttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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