KEGG   Monosiga brevicollis: MONBRDRAFT_32554
Entry
MONBRDRAFT_32554  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mbr  Monosiga brevicollis
Pathway
mbr03022  Basal transcription factors
mbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MONBRDRAFT_32554
  09124 Replication and repair
   03420 Nucleotide excision repair
    MONBRDRAFT_32554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbr03021]
    MONBRDRAFT_32554
   03400 DNA repair and recombination proteins [BR:mbr03400]
    MONBRDRAFT_32554
Enzymes [BR:mbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MONBRDRAFT_32554
Transcription machinery [BR:mbr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MONBRDRAFT_32554
DNA repair and recombination proteins [BR:mbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MONBRDRAFT_32554
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD SBP_bac_6 AAA_22
Other DBs
NCBI-GeneID: 5891292
NCBI-ProteinID: XP_001746078
JGI: 32554
UniProt: A9V0A0
AA seq 835 aa
MASSKRSSSQAEAIDHDEEDFKTPSAVQKTKRTKRTKRASNATANDEEETERIDFEDSDL
TRPDMGIGNTSSFETDEYGAIDMRHALELKPDHPNRPILVTPDGQIFLETFSPIYKQAYD
FLIAIAEPICRPEHIHEYRITSYSLYAAASVGIQTDDIMKYLDRLCKTDLPLPVRKDIRT
CTERYGKVKLVLRSNRYIVETNDEKAISDLLKNPVIRNAKIDDSEVQEQRGGAPSADKFQ
FEGQAAADAARLRTSQAHQEDGDELSDEALVAAADATEELAAVPKDILDLYDRVDEFAAD
TDKTLFSFEIKKEHVESVQAECAPSRLDYPLIGEYDFRRDQKLRDLKIDLKPTCILRPYQ
EKSLSKMFGRTGQARSGIIVLPCGAGKTLTGVTAVSTIKKRAIVLCTSTVAVEQWCSEFR
RWCNVDPSIIRKFTRDDKELPPEDCIICCTYSMLAPKKNRSEEAARVINFLRKREWGIMV
LDEVQTVPAAKFRALLTEIPSHCKLGLTATLVREDGKIDDLRFLVGPKLYEANWMDLQAA
GHIARVQCIEVWCRMTEGFYEEYLRGKNRIHLKRQLCVCNPIKFMYCEYLIRLHEARQDK
IIVFSDDKFALRTLAMQMGKEHIDGDVPDRQRHDIINRYKTTPSFRTIFFSKIADNAFDL
PEANVLIQISSHGGSRRQEAQRLGRILRKKKNDRTKPGEYNAYFYSLVSQDTLEMAYATK
RQRFLVMKYLPGFEDEGRTRPYAFGTEHKQTQLLSRILANKMPGYGVCCAQDEEGRTSIV
GDDDDDLYPAAVQRRATSLSSFSGANNMVYQEIRARTKKNECGLIVLLCLAVCPE
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggcctcttccaagcgcagtagcagtcaagccgaagccattgatcacgatgaggaagac
ttcaagaccccttctgctgtccagaagacaaagcgcaccaagcgcaccaagcgagcctca
aatgcgaccgcgaacgacgaagaggaaactgagcggattgatttcgaggattcagacctg
acacgaccggatatgggaatcggcaacacctcgagctttgaaacggacgaatatggtgcc
atcgacatgcggcatgcactcgagctgaagcccgatcaccccaatcggcctattctagta
actccagatgggcaaatttttttggaaactttttcccccatttacaagcaggcctatgat
tttctcattgccattgctgagcccatctgtcgccccgagcacattcacgagtaccgcatc
acctcgtactccctttacgccgccgcttcagttggtatccagacggacgacatcatgaag
tatctggaccgcctttgcaaaaccgacctacccctgcccgtgcgcaaggacattcgcacc
tgcactgagcgttatggcaaggtcaagctagtgctgcgcagcaaccgctacattgttgaa
accaacgatgagaaggccatctcggatttgctgaagaaccccgtcattcgcaacgccaaa
atagacgatagcgaagtgcaagagcagcgtggcggggccccatctgccgataagtttcag
tttgagggccaggcggctgccgatgccgcccgcctacgaacatcgcaggcccatcaagaa
gatggtgacgagttgtcggatgaggcgctcgtcgccgctgctgatgccaccgaggagctg
gccgcggtgccaaaagacatccttgacctctatgatcgagtggatgagtttgctgctgac
acggacaagacactcttctcctttgaaatcaagaaggagcatgtggaaagcgttcaagca
gaatgtgctccatctcgtctcgattaccctttgattggcgagtatgactttcggcgcgac
caaaagctccgtgatctcaagattgatctcaagcccacctgcattctgcggccctaccaa
gaaaagtcgctcagcaaaatgtttggccggacgggccaagcacgttccggcattatcgtg
ctaccctgcggcgctggcaaaaccctcactggtgtgactgccgtgtcgaccatcaaaaaa
cgtgccatcgtgttgtgcacctccaccgtggctgtggagcagtggtgctcggaatttcgc
cgctggtgcaatgtcgatcccagcattatccgcaagtttacacgcgatgacaaagaacta
ccacccgaagattgtatcatctgctgcacgtactccatgctggcgccaaagaagaatcga
tccgaggaggcagcacgcgtaatcaactttttgcgcaagcgcgaatggggcatcatggtg
ctggacgaggtgcaaacggtacccgctgctaaatttcgagccctcttgacggagattccc
agccactgcaaacttggtctgaccgcaacgctggtccgcgaggatggcaagattgatgac
cttcgatttttggttggcccaaagctgtatgaggccaactggatggatttacaagcggcg
ggtcatatcgcccgcgtacagtgcattgaggtgtggtgccgtatgaccgagggcttttac
gaggagtacctccgtgggaagaaccgcattcatctcaagcggcagctttgcgtatgcaac
cccatcaagttcatgtactgcgagtatctgatccgactgcacgaagcccgacaagacaag
atcatcgtcttttctgatgacaagtttgcacttcgtacgctggcgatgcaaatgggcaag
gagcacattgatggcgacgtaccagatcgccaacggcacgatatcatcaaccgctacaag
accaccccctccttccggaccattttcttttccaagattgccgacaatgccttcgatctg
ccagaagccaacgtcctgattcagatctcttcacatggtggttctcgccgccaagaggcc
cagcgactgggccgcattctacggaagaaaaagaacgaccggaccaagcctggcgagtac
aacgcttacttttacagcctcgtgtcccaagacacgctggaaatggcttatgccaccaag
cgccaacgctttctggtgatgaagtaccttcctggctttgaggacgaagggcgcactagg
ccttatgcttttggcactgagcacaagcaaacacagctcctttctcgcatcttggccaac
aaaatgccggggtatggggtctgctgtgcccaggatgaggagggacgcacttcaattgtt
ggtgatgatgacgatgacctttacccggctgccgtgcaacggcgcgctacctcactttcg
agcttcagcggcgctaacaacatggtctaccaggaaattcgcgctcggacgaagaaaaat
gagtgcggactgatcgttttgctttgccttgccgtgtgtcccgaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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