KEGG   Mus caroli (Ryukyu mouse): 110292495
Entry
110292495         CDS       T05910                                 
Symbol
Topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
  KO
K10631  E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110292495 (Topors)
   03036 Chromosome and associated proteins [BR:mcal03036]
    110292495 (Topors)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mcal03037]
    110292495 (Topors)
Enzymes [BR:mcal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110292495 (Topors)
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110292495 (Topors)
  UBL E3 ligases
   110292495 (Topors)
Chromosome and associated proteins [BR:mcal03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    110292495 (Topors)
Cilium and associated proteins [BR:mcal03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   110292495 (Topors)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 Rad50_zn_hook zf-RING_4
Other DBs
NCBI-GeneID: 110292495
NCBI-ProteinID: XP_021015466
Ensembl: MGP_CAROLIEiJ_G0025894
UniProt: A0A6P5PP79
Position
4:complement(34401788..34412250)
AA seq 1034 aa
MGSQPPPPGSPLSREEGEAPPLVPAEEGRRRSRRVRLRGSCRHRPSLLSRRELASNGPAV
PATASSEIMASAAKEFKTDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRC
LHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTNPEVRRF
RYRTTMTRERSASLYSPSSTVSRRTTTPPDSGVLFEGLGISTRPRDVDIPQFMRQMALRG
PTTTDERSLRKIQEQDIINFRRTLYRAGVRVRSIEDGGRYRDISAEFFRRNPACLHRLVP
WLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISF
ARSPFNMAAFDQHANYDCPPSSEEGSRSDSSVITISPDEAETQELDMNASTVRQAPWDDE
TPGPSYSSSEQVHVGVSSLLNSSDSSDEELVSGGTTSQIQGVQTNDDVNNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGPYDKVETVKTQEQEQSYSSGDSDVSRASSPRSVL
GKDEQMSKSHCDSDTRVNSKKEEKRSTSLPAPRDSSSTRGDRACSPYNHRHRKGGRSRSS
DSRSQSRSGHDPRNHRKHHGKKRLKNKRSRSRDSSSRPRARKDKKRSRTRDSSWSRRSQT
LSLSSGSTSRSRSRSSDRGKRRSRSRNRDRYYLRNNYGSKYKWEYTYYSRNKDRDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNHSERKYYYYERRRSRSVSSNRSRTT
SAGPDRVRNEKPGGKRKYKTRHLEGTSEEAQPAREFTSKGKDSHYQKSKLDGSYKNESDS
FSDSRSSDRETKHKRRRRRTRSLSVEIVYEGKATDTSKHHKKKKKKHKKKHKKHHGDNTS
RSPVVITIDSDSDGDSEVKAGIECSNGSLPQPIQDEAFETKDVVTIEDELGVLDKDCDVT
ALTDDLSTSQTVENCESPAVPVEQTLDVREESTFASDLESQSSNVSVQAEPLRPVPSPRT
SLSSVSPGRDCDVS
NT seq 3105 nt   +upstreamnt  +downstreamnt
atggggtcgcagccgccgccaccggggtctccgctgtctcgcgaggagggtgaagcgccc
cctctggtgcctgccgaggaggggaggcgccgaagccgtcgggtacgccttcgcggatcc
tgccgccaccggccgagcttactgagccggcgggagctcgcttccaacggcccagcggtt
cctgccaccgcgtcctccgagataatggcctcagctgcaaaggaatttaaaacggacaac
ttttcacctaaagctggcactagcaaattgcagcagacagtaccagctgatgcatctcct
gattctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagatcgttgc
ctacataagttctgttttcgctgtgtacaagagtggtccaaaaacaaagccgaatgccca
ctgtgtaaacagccctttgattctattttccattcagtgagggctgaagatgacttcaag
gagtatgtcctgaggccttcctataatggttcctttactaaccctgaggttcgaaggttt
cgctaccggacaactatgacgagagaacggagcgcctctctttattcacccagtagtact
gtaagtaggagaacaactacgccaccagatagtggagtgctgtttgaagggttaggcatt
tcgacaagacctagagatgttgacattcctcagtttatgagacaaatggcattaaggggg
ccaactactacagatgagagatctttgcggaaaattcaagaacaagatattattaatttc
aggcgaactctttatcgtgctggtgttcgagttagaagtattgaagatggtggccgctac
agggatatttcagctgagttcttccgtagaaatccagcttgccttcacagattagttcct
tggttaaagcgtgaacttactgtgctttttggagcccatggttcgctagtcaatatcgtc
cagcacatcatcatgagtaatgttactcgctatgatttggagagtcaggcatttgtgtct
gacttaagaccatttttgcttaatcgaactgagcattttatacatgaatttatcagtttt
gctagatctcccttcaatatggcagcttttgaccagcatgctaattatgattgccctcct
tcatctgaagaaggcagccgttcagattcatcagtcattacaatatcaccagatgaggct
gaaactcaagagctagatatgaatgcatctactgttaggcaggcaccatgggatgacgaa
actcctggaccatcctattcaagttcagagcaagtgcatgttggcgtgtcttccctttta
aattcttcagacagttcagatgaagaacttgtctctggaggaaccacatctcagatacaa
ggggtacagaccaatgacgatgtcaataatgacagtgattcatcgtcagataattgtgtc
attgttgggtttgttaagccgttagctgaaaggaccccagaacttgttgagctgtcttct
gattctgaggagttgggcccttatgacaaagtggagacagtgaagactcaggagcaagag
cagtcttacagttcaggtgacagtgatgttagccgggcgtcatctccacgctctgtcctt
ggaaaagatgaacaaatgagtaaaagccattgtgattctgacacaagagtaaactcaaag
aaagaagagaaacgatctacatcattgccagctcccagggacagctcatctacaagaggt
gacagggcatgttccccatacaaccatcgacacaggaagggaggaaggtcgaggagttct
gattcccggtcccagagtagaagtggccatgacccgaggaatcacagaaagcaccatggg
aagaaaagattgaagaacaagagatccagaagcagggacagtagtagcaggccgagagca
agaaaggacaaaaagagatccagaactagagatagcagctggtcccggagaagccagaca
ctttctctaagtagtggaagcaccagtagatcgcggtctcgtagcagtgatcgtggcaaa
agaagatcacgaagcagaaatcgagatcgctattatttaagaaataattatggaagcaaa
tataagtgggaatatacttactacagcagaaacaaggacagagatggttatgagtcatca
tacaggaggaggactctttcaagagcccattactctagacagtcttcaagtccagaattt
agaattcagtctttttctgaaagaacaaatgcgaggaagaagaatcacagtgaaaggaaa
tactactactatgaaaggcgccgctccaggagcgtgtccagtaacaggtcgaggactaca
tccgctgggcccgaccgggtgagaaatgagaaacctggagggaaacgcaagtacaaaacc
cggcatttggaaggtaccagtgaagaggctcagccggctcgggagttcacttccaaaggg
aaggacagtcattaccaaaaatcaaaattggatggcagttataaaaatgagagtgacagt
ttttcagatagcagatcatcagacagagagacaaaacacaagaggaggaggaggaggacc
cggagcctaagtgtagagatagtttatgaaggaaaggctacggacacaagcaaacaccat
aagaagaaaaagaagaaacataagaagaagcataagaaacaccatggagacaatacgtca
cggtcaccagtggttataaccatcgacagtgacagcgatggagactctgaagtgaaggca
ggtattgaatgtagcaatggcagtcttccacagcctatacaagatgaagcatttgaaact
aaagatgttgtcacaatcgaagatgagcttggtgtcctggacaaggactgcgatgttaca
gcacttactgatgacttgagtaccagccaaactgtggagaattgtgaatcaccggcagtc
ccagttgaacaaactcttgatgtaagagaagaaagcacctttgcctctgatttggagagc
cagtcaagtaatgtgtctgttcaggctgaaccattgagaccagtgccatctccacggacc
tccctgtcatcagtgtctcctggtagagactgtgatgtgtcttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (25)   

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