KEGG   Mus caroli (Ryukyu mouse): 110294937
Entry
110294937         CDS       T05910                                 
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcal03009]
    110294937 (Ddx55)
Enzymes [BR:mcal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110294937 (Ddx55)
Ribosome biogenesis [BR:mcal03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110294937 (Ddx55)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 AAA_22
Other DBs
NCBI-GeneID: 110294937
NCBI-ProteinID: XP_021019048
Ensembl: MGP_CAROLIEiJ_G0027755
UniProt: A0A6P5PRF0
Position
5:117563880..117583637
AA seq 466 aa
MLPQRCGRLKPAEKPGRAMEHVTEGAWESLQVPLHPRVLGALRELGFPHMTPVQSATIPL
FMKNKDVAAEAVTGSGKTLAFVIPILEILLKREEKLKKNQVGAIVITPTRELAIQIDEVL
SHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCV
KSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVR
ISVKEKGVAASSTQKTPSRLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEY
YGKALEALLKKVKILCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQ
YDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTID
LLPKLRAMALADRAVFEKGMKAFVSFVQAYAKHECSLIFRLKGLQL
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgctcccgcagcgttgcgggcgactgaaaccagcagagaagccgggccgcgccatggag
cacgtgacggagggtgcctgggagtcgctgcaggtgccactgcaccctcgggtgctcggt
gcactgcgcgagttgggcttcccgcacatgacgccggtgcagtctgcaaccatccctctg
ttcatgaaaaacaaagatgttgccgcagaggctgtgacgggtagtggaaaaaccctggcc
tttgtcatccccattctggagattcttctgaaaagggaggagaagttaaagaagaaccag
gtaggagccattgtcatcaccccgactcgcgagctggccattcagattgatgaagtcctg
tcacacttcacgaagcactttccgcagttcagccagattttgtggattggaggccggaac
cctggagaagatgtggagaggttcaagcagcacggcgggaacatcattgtggcaacccct
gggcgactggaggacatgttccggaggaaggctgagggtctggacctggccagctgtgtg
aagagcttggatgtgctggtgctggacgaggcagacagactgctcgacatgggctttgag
gcaagcataaacacaatcctagagtttttgccaaagcagagaagaacaggcctcttctca
gccacacagacacaggaagtggagaacttggtgcgagcaggcctccggaaccctgtccga
atctctgtgaaggagaagggtgtggcagccagcagtacccagaagaccccgtctcgcctg
gagaaccactatatgatctgtaaggcagatgagaaattcaaccagctggtccatttcctt
cggagccgtcagcaggagaagcacctggtcttcttcagcacgtgtgcgtgtgtggaatac
tatgggaaggccctggaggcgctgttgaagaaagtgaagatcctgtgcatccatgggaag
atgaagtacaagcgcaataagatcttcatggagttccgcaagctgcagagtgggatcctg
gtgtgcactgacgtgatggcccggggaattgatattcccgaagtaaactgggttttgcag
tatgaccctcccagcaatgccagtgccttcgtgcatcgatgtggacgcacagcccgcatt
ggccatggtggcagtgccctggtgttcctgctgcccatggaggaggcctacatcaacttc
ttggccatcaaccagaaatgccccctgcaggagatgagcctccagagaaacactatagac
cttctgccgaagctccgggccatggctctggctgacagagctgtgttcgagaagggcatg
aaagcctttgtgtcctttgtgcaggcttatgcgaagcacgagtgcagcctcatcttcagg
ctgaagggattgcagctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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