KEGG   Macaca fascicularis (crab-eating macaque): 102132562
Entry
102132562         CDS       T02918                                 
Symbol
COL5A1
Name
(RefSeq) collagen alpha-1(V) chain isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
mcf  Macaca fascicularis (crab-eating macaque)
Pathway
mcf04820  Cytoskeleton in muscle cells
mcf04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mcf00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102132562 (COL5A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102132562 (COL5A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mcf00536]
    102132562 (COL5A1)
Glycosaminoglycan binding proteins [BR:mcf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102132562 (COL5A1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 102132562
NCBI-ProteinID: XP_045230166
Ensembl: ENSMFAG00000035998
Position
15:complement(108305521..108515388)
AA seq 1841 aa
MDVHTRWKARSPLRPGAPLLPPPLLLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITK
TTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLV
SIYNEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSIHKKNV
TLVLDCKKKTTKFLDRSDHPMIDVNGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYC
EHYSPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPV
EAAKETTAVPEELTPTPTEAAPTPETSEAAGKEEDPGIGDYDYLPIEDYYTPSPYEDLTY
GEGEENPDQPTDPGAGAEIPTSTAGTSNSSYPAPPPGEGADDLEGEFTEETIRNLDENYY
DPYYDPTNSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPA
GLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGP
MVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQ
GPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPP
GDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEP
GPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQ
GPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPR
GEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEK
GGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPT
GFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHP
GPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNE
GPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQ
GPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGAD
GEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPR
GPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPS
GAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSP
GPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPD
GLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQ
GEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEA
GHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNS
LKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGG
STCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSAS
AHQNVTYHCYQSVAWQDAATGSYDKAIRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQK
TVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG
NT seq 5526 nt   +upstreamnt  +downstreamnt
atggacgtccatacccgctggaaagcgcgcagcccgctccgccccggcgccccgctgctg
cccccgccgctgctgctgctgctgctgctgctgtgggcgccgcctccgagccgcgcagct
cagccagcagatctcctgaaggttctagattttcacaacttgcccgatggaataacaaag
acaacaggcttttgcgccacgcggcgatcttccaaaggtccggatgtcgcttacagagtc
accaaagacgcgcagctcagcgcacccaccaagcagttgtaccctgcgtctgcatttccc
gaggacttctccatcctaacaactgtgaaagccaagaaaggcagccaggccttcctggtc
tccatctacaacgagcagggtatccagcagattgggctggagctgggccgctctcccgtc
ttcctctacgaggaccacacggggaagcctggcccggaagactaccccctcttccggggc
atcaacctgtcagatggcaagtggcacagaattgctctcagcatccacaagaaaaatgtc
accttggtcctcgactgtaaaaagaagaccaccaaattcctcgaccgcagtgaccacccc
atgatagacgtcaacggcatcatcgtgtttggcacccggatcctggatgaggaggtgttt
gagggtgacatccagcagctgctctttgtctcggaccaccgcgcagcttatgattactgc
gagcactatagccctgactgtgacactgcagtacctgacaccccacagtcacaggacccc
aatccagatgaatattacacggaaggagacggcgagggtgagacgtattactacgaatac
ccctactatgaagaccccgaagacctggggaaggagcccacccccagcaagaagcccgtg
gaagctgccaaagaaaccacagcagtccccgaggagctgaccccgacccccacggaagca
gctcccacgcctgaaaccagtgaagcggctgggaaggaagaggaccccggcatcggggac
tatgactacctgcccatcgaggactactacactccctcgccttacgaggacctcacctat
ggcgagggggaggagaaccccgaccagcccacagatccaggcgccggggccgagattccc
accagcaccgccggcacctctaactcctcctacccagctccgcctccaggggaaggtgcg
gatgacttggagggggagttcactgaggaaaccatcaggaaccttgacgagaactactac
gacccctactatgaccccaccaactccccgtcggagattgggccaggaatgccggcgaac
caggataccatctatgaagggattggaggacctcggggcgagaaaggccaaaagggagaa
ccagcaatcatcgagccgggcatgctcatcgagggcccgcccggcccagaaggccccgcg
ggtcttcccggacctccaggaaccatgggtcctactggccaagtcggggaccctggagaa
aggggcccccctggacgcccaggccttcctggagccgatggcctgcccggtcctccagga
accatgctcatgctgcccttccggtttggaggtggtggcgatgcgggctccaaaggcccc
atggtctcagcccaggagtcccaggcgcaagccattctccagcaggccaggttggcactg
aggggaccagctggcccaatgggtctcacagggagacccggccctgtgggtccccctggg
agcggaggtttgaagggcgagccgggagacgtggggcctcagggtcctcgaggtgtgcaa
ggcccgcctggtccggccgggaagcccggaagacggggtcgggctgggagtgacggagcc
agaggaatgcctggacaaactggccccaagggtgaccggggtttcgacggcctggctggg
ttgccgggcgagaagggccacaggggtgaccctggtccttccggcccgccaggacctcca
ggagacgacggagagaggggtgacgacggagaagtcgggcccagggggctgcctggggag
cccgggccacgtggtctgcttgggccgaaggggcctccaggtcctcccggacctcccggt
gtaacgggcatggacggccagccggggccgaaaggaaatgtgggtccccagggagagcct
ggccccccgggacagcagggtaatccaggtgctcagggtcttccaggcccccagggtgca
attggtcctccaggagaaaagggtcccttgggtaaaccaggccttccaggaatgcccggt
gctgacggacccccgggacaccctggcaaagaaggccctccaggagagaaaggaggtcag
ggtccacctggcccccagggtccgatcggctacccaggtcctcgaggagtcaagggggcc
gatggcatccgtggtctgaagggcacgaagggtgagaagggtgaagacggctttcctggg
tttaaaggagacatgggcatcaagggtgatcggggggagatcggcccgcccggtcccagg
ggagaagatggccctgaaggcccgaagggtcgcggaggtcccaatggtgatcccggtcct
ctggggccccctggggagaagggaaaactcggagtcccagggttaccagggtacccagga
agacaaggaccaaagggctctattggattccctggatttcctggcgccaatggagagaag
ggcggcagggggacccctggaaagccgggaccgcgggggcagcgaggcccaacgggtcca
aggggtgaaagaggcccccggggcatcactgggaaacctggccccaagggcaactctgga
ggtgacggcccagctggccctcctggtgaacggggacccaacggaccccaaggacccacg
ggatttcctggaccaaagggcccccctggccctccaggcaaggatggactcccggggcac
cctggacagagaggcgagactggtttccaaggcaagactggccctccaggccccccaggc
gtggtcggccctcagggtcccacgggagaaacgggcccaatgggtgagcgtggccaccct
gggccccctggaccccccggtgaacaggggcttccgggccttgctggaaaagaagggacg
aagggtgacccaggccccgcaggcctccctgggaaagatggccctccaggattacgtggt
ttccctggggaccgagggcttcctggtccagtgggagctcttggactgaaaggcaatgaa
ggaccccctggcccgccaggccctgcgggatctccaggggagagaggtccagccggagcc
gctgggcccattggaattccagggagacctgggccccagggacccccagggccagcagga
gagaaaggggctcctggtgagaaaggcccacaaggcccagctggccgagacggtctccag
ggtcctgtgggactcccgggtccagctggccctgtgggtccccctggagaagacggagat
aagggagagatcggggagccagggcagaaaggaagcaaaggggacaaaggagagcagggt
cctcccgggcctacaggtcctcaaggccccatcggacagccgggtccctctggagctgac
ggcgagccagggcctcggggccagcagggccttttcgggcagaaaggtgatgaaggtccc
agaggctttcctggaccccctgggccagtggggcttcagggtttgccaggacctccaggt
gagaagggtgagacaggagacgtgggccagatgggccccccaggtccccctggcccccga
ggaccctccggagctccaggtgctgatggcccacagggtcccccaggtggaataggaaac
cctggtgcagtgggagagaagggcgagcccggcgaagcaggcgagcctggccttccagga
gaaggcggccccccgggacccaaaggagaaaggggagagaagggcgagtcgggcccttcg
ggtgctgctggaccccctggacccaaaggccctcccggagacgatggtcctaaaggcagc
cctggcccagtgggttttcctggagatcccggtccccctggagagcctggccccgcgggt
caagatggtccccctggtgacaaaggagatgatggtgaacccgggcagacgggatccccc
ggccctactggcgaaccaggtccatctgggcctccaggaaaaaggggtcccccgggcccc
gcaggccccgaaggcagacagggagagaaaggggccaagggagaagctggcttggaaggc
cctcctgggaagactggccccatcggtccccagggggcccctgggaagcccggacccgat
ggccttcgagggatccctggccctgtgggtgaacaaggtctcccaggatccccaggcccg
gatggtccccccggccctatgggtcccccaggacttcccggcctcaaaggagattctggt
cccaaaggtgaaaagggtcatccaggcctgatcgggctcatcggtcctccgggtgaacag
ggtgagaagggcgaccgcggtctccccggcccccagggctcctccggtcctaagggagaa
cagggtatcactggtccttccggcccgattgggcctcctgggccccctggtctgccgggt
ccgcctggtccaaaaggtgctaagggctcctcgggtccaactggcccgaagggtgaggca
ggccacccaggccccccaggccccccgggccccccaggagaggtcatccagcccctgccg
atccaggcatccaggacgcggcggaacatcgacgccagccagctgctggacgacgggaat
ggcgagaactacgtggactacgcggatggcatggaagagatcttcggctctctcaactcc
ctgaagctggagattgagcagatgaagcggccgctgggcacgcagcagaaccccgcccgc
acctgcaaggacctgcagctctgtcaccccgactttccagatggtgaatactgggtcgat
cctaaccaaggatgctccagggattccttcaaggtttactgcaacttcacagccgggggg
tcgacatgcgtcttccctgacaagaagtctgaaggggccagaatcacttcttggcccaaa
gaaaacccgggctcctggttcagtgaattcaagcgtgggaaactgctctcctatgtggac
gccgagggcaacccggtgggcgtggtacagatgaccttcctgcggctgctgagtgcctca
gcccaccagaacgtcacctaccactgctaccagtcagtggcctggcaggacgcagccacg
ggcagctacgacaaggccatccgcttcctgggctccaacgacgaggagatgtcctatgat
aacaacccctacatccgcgccctggtggacggctgtgcaaccaagaaaggctaccagaag
acggttctggagatcgacacccccaaagtggagcaggtgcccatcgtggacatcatgttc
aatgacttcggtgaagcgtcacagaaatttggatttgaagtggggccagcttgcttcatg
ggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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