KEGG   Mycobacteroides chelonae: BB28_04025
Entry
BB28_04025        CDS       T04665                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mche  Mycobacteroides chelonae
Pathway
mche03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mche00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    BB28_04025
  09124 Replication and repair
   03420 Nucleotide excision repair
    BB28_04025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mche03021]
    BB28_04025
   03400 DNA repair and recombination proteins [BR:mche03400]
    BB28_04025
Enzymes [BR:mche01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BB28_04025
Transcription machinery [BR:mche03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     BB28_04025
DNA repair and recombination proteins [BR:mche03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     BB28_04025
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ANA97010
Position
complement(783400..785052)
AA seq 550 aa
MTDGPLIVQSDKTVLLEVDHDQADAARQAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVTFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLLSLDRAVLEEVL
RHKKLAPMFGTRIDDDTVQVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLAQDGW
ELRDYQQMAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTLTENERMIYATAEADERYKLCSTAHTKINVVKSILARHPGVPSLVIGAYLD
QLDELGAELGAPVIQGSTKNAEREALFDAFRRGEIATLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGQAYFYSVVSRDTLDAEYAAHRQRFLAEQGYGYRITD
ADDLLGPAIG
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaccgatggaccgctgatcgtccaatccgataagaccgtgctgctggaggtcgaccac
gaccaggcagatgcggcacgccaggcgatcgcccccttcgccgagctcgaacgcgccccc
gagcacgtgcacacctaccgcatcacgccactggcgctgtggaacgcccgcgccgccggg
catgacgccgagcaggttgtcgacgccctggtcaccttctcccggtacgcggtaccgcaa
ccgctgttggtggacatcgtcgacaccatggcccgctacggacgtctgcagctcgtcaaa
catccggcgcatggtctgacgttgctgagcctggatcgcgccgtcctcgaagaggtactg
cggcataagaagctcgcccccatgttcggcacccgcatcgatgacgacaccgtgcaggtg
caccccagcgagcgtggccgcgtcaagcagttgctgcttaaaatcggctggccggcagag
gatctcgccggttacgtcgacggtgaagctcacccgatcagcctggctcaggatggttgg
gagcttcgggactatcagcagatggcagccgactcgttctgggcgggcggttccggcgtg
gtggtcctgccctgtggtgccggtaagacgctggtgggtgccgcggcgatggccaaggcc
caggcgaccaccctgatcctggtgaccaacaccgtcgccggtcggcagtggaaacgggag
ctgatcgcgcggacctcgttgaccgaagaggagattggcgaatactccggtgaacgcaag
gagattcggccggtcaccatcgcgacctatcaggtgatcacccggcgcaccaagggcgaa
taccgccacctggagctgttcgacagccgggactggggcctgatcgtgtacgacgaggtg
catctgctgcccgctccggtgttccggatgacggcggacctgcagtcgcgccgccgcctg
gggctgaccgccaccctcatacgggaggacggccgcgagggcgacgtgttcagcctcatc
gggcccaaacgttatgacgcaccgtggaaagacattgaggcacaaggctggattgccccc
gccgagtgcatcgaggtgcgggtcacccttaccgagaacgagcgaatgatctacgcgacg
gccgaggccgacgagcgctacaaactgtgctcgacagcccatacgaagatcaacgtggtg
aagtcgatcctggcccgccatccgggagttccctcgctggtgatcggcgcctacctcgat
cagctcgacgaactgggcgccgagctcggcgccccggtgatccagggctccaccaagaac
gccgaacgcgaagcgctcttcgacgctttccgtcgcggggagatcgccaccctggtggtc
tccaaggtggccaacttctccatcgacctgccggaagcagctgtagcggttcaggtttcg
ggtacgtttggctcacgtcaagaggaagcgcagcgacttgggcggttgctacggccgaag
gcagacggcggacaggcctatttctattcggtggtgtcgcgcgacaccctcgatgccgaa
tacgccgcccaccggcagcgattccttgccgagcagggttacggctaccggatcaccgat
gccgacgacctgctcggaccggcgattggttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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