KEGG   Malus domestica (apple): 103441115
Entry
103441115         CDS       T03194                                 
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
mdm  Malus domestica (apple)
Pathway
mdm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103441115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103441115
   03041 Spliceosome [BR:mdm03041]
    103441115
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103441115
Spliceosome [BR:mdm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103441115
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 103441115
NCBI-ProteinID: XP_028962146
Position
8:8368815..8375987
AA seq 468 aa
MAGELVQIIPPPVAKALPESQATSSRSLREGKRCNSCFVLGLSFPPFNKPKRVAQENQIK
GKQWKTTRQRGDAGGGRRRVAASPPPPKKPEKSPYEMLQDSKSSVEDIVAKMIAIKKEAK
PKSELRELVTQMFLNFVTLHQANRSILLEEDRVKAETERAKAPVDLTTLQLHNLMYEKSH
YVKAIKACKDFKSKYPDIELLPEEEFFRDAPANIKEPMLSNDASHDIMLKRLNFELHQRK
ELCKHHEKLEIHKKGLLETIANRKKFLSSLPSHLKSLKKVSLLVQNQLGIQHTXKLKQHH
SAELLPPALYVVYSQFMAQKEAFDEQIELDVVGSVKDAQAFTHQQANKDTGVATNVETSR
VDDAPDEDDDGQRRRKRPKRVPVKQNLEQSGLYQVHPLKIILHIYDDEVSDPKSAKLITL
KFEFLLKLNVVCVGIEGSHDAAENNILCNLFPDDTGLELPHQILVYDS
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggccggtgaactggttcagattattcctccacctgttgccaaagcactgccggaatcc
caagcgacgtcgagtcgttcgcttcgggagggaaaaaggtgcaattcttgttttgtcctt
ggtctttcttttccccctttcaataaaccaaagcgagtcgcacaggaaaatcaaattaag
ggaaagcaatggaagacgacgagacagagaggggatgctggtggaggaagacgccgcgtc
gccgcgtcgccgccgccgcctaagaagccggagaagtcgccctacgaaatgcttcaggac
agcaaatcctcggtggaggacatagtggcgaagatgatcgccattaaaaaagaagccaaa
cctaaatcggagctccgcgagctcgtcactcagatgttcctcaacttcgtcaccctccac
caggcgaatcgctcgatcttgctcgaggaggaccgagtgaaggccgagacggagagagcc
aaggcgccggtggacttgacaacgctgcagctccacaatctgatgtacgagaagagccac
tacgtgaaagccattaaagcttgcaaggacttcaagtccaagtacccggacatcgagctg
ctgccggaagaagaattctttcgcgacgcaccggccaatatcaaggagccaatgctgtcg
aatgatgccagccacgacattatgctcaagaggctcaattttgagctccaccagcgcaag
gagctctgcaagcatcatgagaagctggagattcataagaagggtctgttggagacgatt
gcaaatcggaagaagttcctgtccagccttccttcgcacttgaagtcgctaaagaaggtt
tctttgctggtgcagaaccagttggggattcagcatacctagaagctcaagcagcaccac
tcagcggagttgcttccgccagctttgtatgtagtttactcgcagttcatggcgcagaag
gaggcgtttgacgaacaaattgagttggatgtagtggggagtgtgaaggatgctcaagct
tttacccaccagcaagcaaataaggacaccggcgttgctaccaatgtagagactagtagg
gtggatgatgcaccagatgaggacgatgatgggcagagaaggagaaaacggccaaagagg
gttccagtcaagcaaaaccttgagcagtcaggattgtatcaagttcatccgctgaaaatc
atccttcatatttatgatgatgaggtttctgatcccaagtctgcaaaacttatcacactc
aagtttgagtttttgttgaagttgaatgttgtatgcgttggaattgaaggatcccatgac
gcagcggaaaataacatcttatgcaacctattcccagatgacactggccttgagcttccc
catcagatactagtttatgactcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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