KEGG   Malus domestica (apple): 103452980
Entry
103452980         CDS       T03194                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ISWI chromatin-remodeling complex ATPase CHR11
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103452980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103452980
   03036 Chromosome and associated proteins [BR:mdm03036]
    103452980
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     103452980
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    103452980
   RSF complex
    103452980
   WICH complex
    103452980
   B-WICH complex
    103452980
   NORC complex
    103452980
   BRF complex
    103452980
   NuRF complex (fruit fly)
    103452980
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C ResIII HAND Myb_DNA-binding DEAD HDA2-3 DBINO AAA_14
Other DBs
NCBI-GeneID: 103452980
NCBI-ProteinID: XP_008390724
Position
13:complement(14170939..14177819)
AA seq 1079 aa
MARASKPQVSSDEALSNGSNSSDEEPINDQEEDEVDEEELEAVARPADSDDDEVAADENS
PGSDDDVPVDENDDGLDGEEDDEANLSNAEIGKREKARLRDMQNMKRQKVQEILDAQNAA
IEADMNNKGKGRLKYLLQQTELFAHFAKGDPSASQKKVKGKGRHASKITEEEEDEECLKE
EEDGLAGAGTTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTI
SLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERKHIREDLLV
AGNFDVCVTSFEMAIKEKTCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNFRLLIT
GTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRL
KSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCN
HPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDY
LMLRGYLYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYD
SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA
EQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELDAKMKKFTEDAI
KFKMDDTAELYDFDDEKDDKLDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQGAPAK
PXEPRIPRMPQLHDFQFFNTQRLNELYEKEVRFLMQTHQKNQLKDTIEVEEPEEVGDPLT
AEEVEEKESLLEEGFSTWSRRDFNTFIRGCEKYGRNDIKSIAAEMEGKTEEEVERYAKXF
KERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLY
NEECDRFMICMVHKLGYGNWDELKAEFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEK
ENQEYDERERQARKEKKLAKSMTPSKRALGRQPTESPNTGKKRKQLTMDDYVSSGKRRK
NT seq 3240 nt   +upstreamnt  +downstreamnt
atggcgagagcttcgaagcctcaggtttcgtccgacgaagccctatccaacggctccaat
tcgtccgacgaagagccgatcaacgaccaggaggaggacgaggtcgatgaggaggagctc
gaagccgtggctcgccccgctgactccgacgacgacgaggtcgccgccgacgagaactcc
cctggctccgacgatgacgtgccggtcgatgagaacgatgatggtttggatggagaagag
gatgatgaagctaatttaagtaatgctgaaattggaaaacgtgagaaggcgaggctcaga
gacatgcaaaatatgaagagacaaaaggttcaggaaatattggatgcacaaaatgcagcc
attgaggctgacatgaacaataaggggaagggacggttgaagtatcttctgcagcaaaca
gagttatttgcccattttgctaaaggtgacccatctgcatctcagaagaaagtgaaggga
aaaggtcgccatgcttccaaaataactgaagaggaagaggatgaagaatgccttaaggag
gaagaagatggtttggctggggctggaaccacacggcttttgacacaaccttcttgtatt
caggggaagatgagggattaccaactggctggattgaactggctcatacgactctatgaa
aatggtataaatggaatccttgcagatgaaatggggcttggtaaaacattgcaaaccatc
tccttattgggatacctgcatgagtttagaggaataactggccctcatatggtagttgct
ccaaagtctactcttggaaactggatgaatgagattcggcgtttctgccccatcttgcgt
gctgtgaagtttcttggtaatcctgatgaaagaaagcatatacgtgaggacctgctggtt
gccgggaattttgatgtatgtgttacaagttttgaaatggccatcaaagagaagacctgc
ttacgccgttttagctggcgttatataataattgatgaagctcatcgtatcaagaatgag
aattcactgctttcaaaaacaatgaggctgtataatactaacttccgcctcctaattacg
ggtacaccacttcagaataatcttcacgaactatggtctctgcttaactttctcctgcca
gagatatttagttctgctgaaacttttgatgaatggtttcaaatatctggtgagaacgac
cagcaagaggttgttcaacagcttcacaaggtcctccggccatttcttcttagaaggttg
aagtcagatgttgagaaaggtttgcctccgaaaaaagaaacaatactcaaagtaggcatg
tcacaaatgcagaaacagtactacagggctttattacaaaaagatcttgaagttgttaat
gctggtggagaacgtaagcgccttctgaacatagcaatgcagcttcgtaagtgctgtaat
catccttatctttttcaaggtgctgagcccgggcctccttatacgactggagaccatctc
atcacaaatgctggtaaaatggttcttttggataagttgcttccaaagttaaaggagcgt
gattctagggtcctaatattttcacagatgactaggctgctagatatcctggaagattat
ttaatgttacgggggtacctgtattgtcggattgatggcaatactggtggagaagatcgt
gatgcttctattgatgccttcaacaagcctggaagtgagaaatttgtatttttgctatca
accagagctggaggacttggtattaatcttgccactgcagatgttgtcatcctttatgac
agtgattggaaccctcaagttgatttgcaagcacaagatcgtgctcacaggattggtcaa
aagaaagaagttcaagtgttccggttctgcaccgagtatactattgaagaaaaagttatt
gagagggcttataaaaagcttgctcttgatgctttggtgattcaacaagggcgcttagca
gagcaaaaaactgttaataaagatgagttacttcaaatggtgaggtttggtgctgaaatg
gtcttcagttccaaggatagcaccattacagatgaggacatagataggattattgctaaa
ggagaagagacaactgctgagcttgatgcaaagatgaagaaatttactgaagatgctatc
aaatttaagatggatgatactgctgaattgtatgactttgatgatgaaaaggatgacaag
cttgatttcaagaaaattgttagcgataactggattgaaccaccaaaaagagagcggaag
cgcaattactcagagtccgaatactttaagcaaacaatgcgccaaggtgctccagcaaaa
ccgnaagagcctcgaattccacgcatgcctcaattacatgatttccaatttttcaacaca
cagaggttgaatgagctgtatgagaaggaagtacggttcctcatgcaaactcatcagaag
aatcagttgaaagatacaatagaggtggaggaaccagaagaagttggagatcctttgact
gctgaggaggtggaagaaaaggaaagcctgttagaagagggtttctctacttggagtaga
agagattttaataccttcattaggggctgtgagaagtatggccgtaatgacataaaaagc
attgctgctgagatggaagggaaaacagaggaggaagttgaaagatacgcaaagngtttt
aaagaaagatacaaggagttaaatgattatgacaggatcattaagaacattgaaagaggt
gaggccagaatttcccgcaaagatgagatcatgaaagccattgggaagaagttggatcgt
tacaagaatccatggctggaattgaaaatccagtatggtcaaaacaaggggaagttgtac
aatgaagaatgcgatcgtttcatgatatgcatggttcacaaacttgggtatgggaattgg
gacgaattgaaggcagaattccgcacatcacccttgtttcgttttgattggtttgtgaag
tctcgcacaactcaggaacttgctaggaggtgtgatacattaattagattggtggagaaa
gagaaccaagaatacgatgagagggagagacaggcccgcaaagagaagaagcttgctaag
agcatgacaccatcaaagcgggccttgggtagacagccaactgagagcccaaatactgga
aagaagaggaagcaattaaccatggatgattatgtcagctcgggaaaaaggaggaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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