KEGG   Monodelphis domestica (gray short-tailed opossum): 100015034
Entry
100015034         CDS       T01031                                 
Symbol
CHD3
Name
(RefSeq) chromodomain helicase DNA binding protein 3
  KO
K11642  chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100015034 (CHD3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdo03036]
    100015034 (CHD3)
Chromosome and associated proteins [BR:mdo03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100015034 (CHD3)
  Chromatin remodeling factors
   NuRD complex
    100015034 (CHD3)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 PHD Chromo HDA2-3 ResIII DEAD HMG_box PHD_2 AAA_22
Other DBs
NCBI-GeneID: 100015034
NCBI-ProteinID: XP_007483226
Ensembl: ENSMODG00000007509
Position
2:complement(254524876..254551425)
AA seq 1987 aa
MLYWKNNRITSQNGPNLYDDEIGLPPSALGVKKRKRGPRKQKENKPGKPRKRKKLDSEEE
FGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKEKKTKRRKRGEGDGGQKVEQKSSAT
LLLTWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFS
ANNPFKGSAAAVAAAAAAAAAAVAEQVSSAVSSVTSTAPPGPPPPPADLQPPPIRRAKTK
EGKGPGHKRRSKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKRKKGGSSDEGPEPEAEESD
LESGSIHSASGRPDGTTRTKKLKRGRPGRKKKKVAGEEEVDGYETDHQDYCEVCQQGGEI
ILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEE
EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK
ILYWRWGEPPVAAPTPQLAEGSPDIQVPRPLQGRSEREFFVKWVGLSYWHCSWAKELQLE
IFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKSKDPHYAEMEEKFYRFGIKPEWM
TVHRIINHSMDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYDAHKNSYWRHRELIMGED
PAQPRKYKKKKKELQGDGPPTSPTNDPTVKYENQPRFITATGGTLHLYQLEGLNWLRFSW
AQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKF
YVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMRREAQVKFHVLLTSYELITIDQAA
LGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTP
ERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPM
QKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYE
GGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT
GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH
RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF
GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQY
VVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYND
AAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLG
FNTRQRKAFLNAVMRWGMPPQDAFTSQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGS
ETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPSADSKRSSRA
SSPTKTSPTTPEASAANSPCTSKPATPTPSEKGDETRTPPEKDEADNSEEKLDKDKKGGE
KMEAEPDAPSPAPSPGEPRRILLGDEESGVPGELEAESGSRGDKEKPEEHKGERESRLGP
SRDESRSNGRREEKSEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYW
LLAGIVLHGYARWQDIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQALVIE
EQLRRAAYLNLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKGKGR
GGPARGRAHNAASEPAGGAAERHESRCDPPSNHPVQNPTHRSPTTDVRAKHSQPSGQQGY
RALSHTGLSSGSLRHTTGVRSSLQLSNTRRGPGRRRRQLQPDARRVLHHSRSQRPARVGE
EGEGGGNGVRRAGSEGAQGWGGDLYRRLKGPQPCHSPRPRGRPPAHIPPLGIAANPPPSP
PPGPPSG
NT seq 5964 nt   +upstreamnt  +downstreamnt
atgttgtattggaaaaataacaggattacaagtcagaatggcccaaatttatacgatgat
gagattgggctcccgccttcagctctaggagtgaagaagagaaaaagaggacccagaaag
cagaaggagaacaagccagggaaaccacggaaacgaaagaagcttgacagcgaagaagaa
tttggctctgaacgtgatgaatatagggaaaagtcagagagtggaggcagcgagtatggg
actggaccaggccggaaaagacgacggaagcaccgtgagaagaaggaaaagaagacaaaa
cgtcggaaaaggggggagggagatggaggacaaaaggttgaacagaagtcatcagccaca
ctgctcctaacatggggtttggaggatgtagaacatgtattctctgaggaggattatcat
acactaactaactacaaggccttcagccagttcatgaggcctctaattgctaagaagaat
cccaagattccaatgtctaagatgatgacaatcctaggggctaagtggcgagaattcagt
gccaacaacccttttaaaggttcagcagcagcagtggcagctgcagcagcagcagctgcg
gcagctgtagctgagcaggtatcatcggctgtttcatctgtcaccagtacagctcctcca
gggcctccaccacctcctgctgatctccagcctccacctatccgaagagccaaaaccaaa
gaaggcaaagggcctggccacaaaaggcgaagtaagagcccccgagtgcctgatggccga
aagaagcttcggggaaagaagatggcaccactcaaaatcaaacttgggttactgggtgga
aagaggaagaagggaggctcaagtgatgaaggccctgagcctgaagctgaggagtctgac
ctagagagtggcagtatccacagtgcctcaggccggcctgatggcaccacccgaaccaag
aaactgaagcgaggccggccaggaaggaagaagaagaaggtggctggggaggaggaagtt
gatggctatgagacggatcaccaggattactgtgaggtgtgccagcagggcggggagatc
attctgtgtgacacctgccctcgtgcttaccaccttgtctgccttgatcctgagctcgac
agagctcctgagggcaagtggagctgcccccattgtgaaaaggagggagtacaatgggaa
gccaaggaagaagaagaggaatatgaagaagaaggagaggaagaaggggagaaagaggaa
gaagatgatcacatggagtattgccgagtatgcaaggatggaggggagctactctgttgt
gatgcctgtatctcctcttaccacatccattgcctgaatcctccattgccagacattccc
aatggtgaatggctatgtccccgatgcacttgccctgtgctaaagggccgagtgcagaag
atcttgtattggaggtggggagagccccctgtggcagccccaactcctcaactggctgag
gggtcacctgatatccaagttcctcgtcctctgcaaggccgatctgagcgagagttcttc
gtcaagtgggttggattgtcctactggcactgctcatgggccaaggagcttcagctggag
atctttcacttggtgatgtatcgaaactaccagcgaaagaatgatatggatgagcctcca
ccactggactatggctctggtgaagatgatgggaaaagtgacaagcgcaagagcaaagac
ccacactatgctgagatggaggaaaagttctaccgattcggcatcaaaccagagtggatg
actgttcacagaatcatcaatcacagtatggacaagaagggaaactaccactacttggta
aaatggagagacttgccatatgaccaatcaacttgggaggaagatgaaatgaacattcct
gaatatgatgcccacaaaaacagctactggaggcaccgggagttaatcatgggggaggac
cctgctcagcctcgaaaatataagaaaaagaaaaaggagcttcagggagatggccctcct
acctctcccaccaatgatcctacagtgaagtatgagaaccagccacggttcatcacagcc
acagggggcacgctacacctataccagctggaagggctaaattggctacgattttcatgg
gcacagggcactgacaccattcttgctgatgagatgggcctgggcaagaccattcaaacc
atcgtcttcctttactccctttataaggagggtcacacaaaaggtccattcctggtgagt
gctccactctcaaccatcattaattgggaacgtgaattccagatgtgggctcccaagttc
tatgtggtgacatatactggggacaaggatagccgtgccatcatccgagaaaatgaattc
tcctttgaagataatgctatcaagggtggcaaaaaggcctttaaaatgaggagggaagca
caggtgaagttccatgttctgctgacatcatatgaattgatcactattgaccaagcagca
cttggctccattcgttgggcctgtcttgtggtggatgaggcccaccggctcaagaataac
cagtccaagttctttagggtgctgaatggctacaagattgatcataagttgctgctgaca
gggaccccacttcagaacaatcttgaggagctcttccatctgcttaacttccttacgcca
gaaaggtttaacaatttagaaggttttctggaggagtttgctgacatatccaaagaggac
caaatcaaaaaactacatgacctattggggccacacatgcttcggaggctcaaggctgat
gtcttcaagaacatgccagccaagacagagctcattgttagggtggagctcagccccatg
cagaagaaatattacaaatatatcctgactcgaaattttgaggcattgaattctcgtggt
ggtggaaaccaagtgtcactcctcaacatcatgatggatctgaagaagtgctgcaaccac
ccctacctcttccctgtggctgctatggagtccccaaaacttcctagtggggcatatgag
ggtggagctcttatcaagtcctcagggaagcttatgctgttacaaaagatgcttcggaaa
ttgaaggaacaagggcatcgagtgctcattttctcccagatgaccaagatgttggattta
ttagaggacttcctagattatgagggctacaaatacgaacggattgatggaggcatcact
ggagcactaaggcaggaagctattgaccgattcaatgcccctggggcccaacaattctgc
tttcttctgtctactcgagctggaggcttaggcatcaatctagccacggctgatactgtt
atcatcttcgactctgattggaatccccacaatgatatccaggccttcagcagagctcac
cggattggtcaagccaacaaagtaatgatttaccggtttgtgacaagagcgtcagtagag
gagcggattacccaggtggccaaaaggaagatgatgctgacacacctggttgtaaggcct
gggttaggctctaaggcaggttcaatgtctaagcaagagcttgatgatatcctcaaattt
ggcacagaagagctgtttaaggatgaaaatgagggagaaaacaaggaagaagatagtagt
gtaatccactatgacaatgaggccattgcccggctcctagaccggaaccaggatgcaact
gaagacacagatgtgcagaacatgaatgagtatctgagctctttcaaagtggcacagtat
gtggttcgggaagaggacaagatcgaggagatagagagagagatcatcaagcaggaggaa
aatgtggaccctgactactgggaaaagttactgagacatcactatgagcagcaacaggag
gacctagcccgaaaccttggcaagggtaaacgtgttcgaaaacaagtcaactataatgat
gctgcacaagaagaccaagacaaccagtccgaatattcagtgggatcagaagaagaggat
gaggactttgatgagcgacctgaagggcgccgtcagtctaagaggcaactacgtaatgag
aaagataagcccctccctccactgttagctcgagttgggggcaacattgaggtgctgggg
ttcaatacccgacagcggaaggccttcctgaatgcagtgatgcgttgggggatgccacca
caggatgccttcacttctcagtggctagtacgggacctgaggggcaaaacagaaaaggag
ttcaaggcctatgtgtctttgttcatgcgacatctctgtgagcctggggcagatggctct
gaaacctttgctgatggtgttcccagggaggggctgagccgacagcaggtgttaacccga
attggagtcatgtctcttgttaagaagaaggtgcaggagtttgaacatatcaatggccga
tggtcaatgccagagttgatgcctgaccctagtgctgactctaagcgttcatcccgagcc
tcttcccctaccaaaacatctccaaccacccctgaggcttctgcagccaatagtccctgc
acatccaaacctgccactccaactccaagtgaaaaaggggatgagacaaggacacctcct
gaaaaggatgaagctgacaattcagaagagaagctagataaagacaaaaaaggaggggag
aagatggaggcagagcctgatgcccccagccctgctccttcaccaggagaaccaaggagg
atacttctaggggatgaagagtctggggtccctggagagttagaagctgaatcaggtagc
cgaggagacaaggagaaaccagaagagcataagggggagagggaatcacgattagggcca
tcccgagatgaatcccggtccaatggacgtcgagaagagaaatcagaaaaaccacggttc
atgtttaacattgcagatggtggctttacagagctgcataccctgtggcaaaatgaggaa
cgggcagctatctcctctggtaaactcaatgagatttggcaccggaggcatgactactgg
ctgctggctggaatcgtcctccatggctatgctcggtggcaggacatccaaaatgatgcc
cagtttgccatcattaacgagccatttaaaactgaggccaacaagggaaacttcctggag
atgaaaaataagttcctagcccggaggttcaagctcctggagcaggcgctggtgatcgag
gagcagcttcggcgggcggcctacctgaacctgtcacaggagccggcgcatcccgccatg
gccctccacgcccgcttcgccgaggccgagtgcctggccgagagccaccagcacctctcc
aaggagtcgctggcggggaacaagccggccaacgcagtcctgcacaagggtaagggccgc
ggcggccccgcgcgggggagggcccacaacgctgcttctgaaccagctggaggagctgct
gagcgacatgaaagcagatgtgacccgccttccaaccaccctgtccagaatcccacccat
cgcagcccgactacagatgtccgagcgaagcattctcagccgtctggccagcaagggtac
agagccctatcccacaccggcctttcctccgggtccctacgccacaccactggggtacgg
agcagccttcagctcagcaacacccgcaggggtcctggccggcggcggcgccaattacag
ccagatgcccgcagggtccttcatcacagccgcagccaacggcccgcccgtgttggtgaa
gaaggagaaggagggggcaatggtgtccgacgggcaggatcggaaggagcccagggctgg
ggaggtgatctgtatagacgactgaaagggccccagccctgccactcaccccgtcccagg
ggccgtcctccagcccacatcccacccctggggattgctgccaatcctccaccttcccca
ccccctgggccaccatcaggatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (50)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (14)   
   Pfam (14)   
All databases (95)   

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