KEGG   Monodelphis domestica (gray short-tailed opossum): 100018843
Entry
100018843         CDS       T01031                                 
Symbol
ERCC3
Name
(RefSeq) ERCC excision repair 3, TFIIH core complex helicase subunit
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022  Basal transcription factors
mdo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100018843 (ERCC3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100018843 (ERCC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdo03021]
    100018843 (ERCC3)
   03400 DNA repair and recombination proteins [BR:mdo03400]
    100018843 (ERCC3)
Enzymes [BR:mdo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     100018843 (ERCC3)
Transcription machinery [BR:mdo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100018843 (ERCC3)
DNA repair and recombination proteins [BR:mdo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100018843 (ERCC3)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_34
Other DBs
NCBI-GeneID: 100018843
NCBI-ProteinID: XP_001366494
Ensembl: ENSMODG00000018695
UniProt: F7FQP6
Position
4:110814931..110867939
AA seq 783 aa
MGKKDKSDRDKKKSKKRHYEEEDDDEDDAPGNESQEAVPSAAGKQVDESGTKLDEYGAKD
YRLQMPLKDDHASRPLWVAPDGHVFLEAFSPVYKYAQDFLVAIAEPVCRPSHVHEYKLTA
YSLYAAVSVGLQTSDITEYLKKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIKELLQDQVIRECRLRNAEGEETELITETFTSKSAISKTSEGGSGPSTSQATDNQN
KSDVPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELAFSSKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSRSTQVSRRFGSMSSMSGADDTVYMEYHTSRSKASVNKHVHPLFKR
FRK
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgggcaaaaaggacaaatctgaccgtgataaaaaaaagtccaagaaaagacactatgaa
gaagaagatgatgatgaagatgatgcccctgggaatgaatctcaggaagcagttccatca
gcagctgggaagcaagtggatgaatctggaaccaaattggatgaatatggggctaaagat
tacagacttcagatgccactaaaagatgaccatgcctcccgcccactctgggtggctccc
gatggccatgtttttctagaagccttctctcctgtttacaagtatgcccaagacttcctg
gtggctattgctgaacctgtatgcagaccaagccatgttcatgaatacaaattgactgct
tattccctgtatgctgctgttagtgttggattacagacaagtgacattactgaatacctc
aaaaagctcagcaagaccggtgttccagatggaatcatgcaatttattaagttgtgtact
gtcagctatggaaaagtcaagctagtgctgaaacacaacaggtactttgtggaaagctct
cacccagatgtcattaaagaacttctccaggaccaggtgatccgagaatgccgcctgagg
aatgctgagggggaagaaactgagctcatcactgaaaccttcacaagcaaatctgctatt
tccaaaaccagtgaaggaggcagtggaccctccacatcacaagcaacagataatcagaat
aaatcagatgtccctgcagacttatttgagttttatgagcaaatggataaagatgaagag
gaagaggaagaaacacagactgtatcttttgaagtcaaacaggaaatgattgaggagctc
cagaagcgctgcatccatctggagtacccattgctggctgaatatgatttccggaatgat
tctgtcaaccctgacatcaacatagacctgaaacccacagctgtcctcagaccctatcaa
gaaaagagcctgaggaagatgtttgggaatggacgtgccaggtcaggggtcattgttctc
ccctgtggagctgggaagtctttggtgggtgtgacagctgcatgcactgtccggaaaagg
tgtctagtacttggcaattcagctgtgtctgtggagcaatggaaagctcagttcaagatg
tggtctaccattgatgacagccagatctgccggtttacttcagatgccaaagataaaccc
attggctgttccatcgctatcagtacctactccatgctgggccataccaccaagagatcc
tgggaggctgaacgagtcatggagtggctcaagactcaggaatggggacttatgatccta
gatgaagtacataccatacctgccaaaatgtttcgacgagtcctcacaatcgtacaggct
cactgcaagttgggtttgactgctaccctcgtccgagaagatgacaaaattgtggactta
aatttcttgattggacccaaactatatgaagcaaattggatggaacttcagaataatggc
tatattgccaaagtccagtgtgctgaggtttggtgtccaatgtctcctgagttttatagg
gaatatgtggcaatcaaaaccaagaagcggatattactatacaccatgaaccccaacaaa
tttagagcctgccagtttttgatcaaattccatgaacgaaggaatgacaagatcatcgtt
tttgcagacaatgtcttcgccctgaaggaatatgctatccggctgaacaaaccctatatc
tatggtcctacatcacaaggggaaaggatgcagattctacagaatttcaagcataatcca
aagatcaacactatcttcatatccaaagtaggagacacttcatttgatcttcctgaagca
aatgttctaattcagatatcttctcatggtggctcccgaagacaagaggcacaaaggttg
gggcgggtgcttcgagccaagaaaggaatggttgcagaggagtataatgccttcttctat
tcgttggtatcccaagatacacaggaaatggcatattcaaccaaacggcagcggttcctg
gtagatcaaggttacagcttcaaggtaattacaaagcttgctggtatggaggaagaagaa
ttggcattttcatctaaagaggaacagcagcagcttctgcagaaagtcttggcagccact
gacttggatgctgaggaagaggtggtagccggagaatttggctccagatccactcaggtg
tcccgtcgttttggctcaatgagctccatgtctggtgcagatgacactgtttatatggag
taccatacttctaggagcaaagcatctgtaaataagcatgtccacccacttttcaaacgc
ttcagaaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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