KEGG   Monodelphis domestica (gray short-tailed opossum): 100616788
Entry
100616788         CDS       T01031                                 
Symbol
CTCF
Name
(RefSeq) CCCTC-binding factor
  KO
K23195  transcriptional repressor CTCF
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mdo03000]
    100616788 (CTCF)
   03036 Chromosome and associated proteins [BR:mdo03036]
    100616788 (CTCF)
Transcription factors [BR:mdo03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100616788 (CTCF)
Chromosome and associated proteins [BR:mdo03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100616788 (CTCF)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-H2C2_5 zf-C2H2_jaz zf-met zf-C2HE zf-C2H2_6 A24_N_bact
Other DBs
NCBI-GeneID: 100616788
NCBI-ProteinID: XP_003339817
Ensembl: ENSMODG00000005757
UniProt: F6QDS6
Position
1:685252838..685301800
AA seq 728 aa
MEGEAVEAIMEESETFIKGKERKTYQRRREGGQDEDACHISQTQADGSEVVQEVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVPQEADATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVAKEGLPEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCTGLDGIDGENGGETKKGKRGRKR
KMRSKKEESSDSEENAEPDLDDNEDEEETAVEIEAEPEVQPVTPAPPPAKKRRGRPPGKS
SQPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAETVEGEEEEPQSAVVEAPNGDLTPE
MILSMMDR
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggaaggtgaggcagttgaagcaatcatggaggagtctgaaaccttcatcaaaggaaaa
gagaggaaaacgtatcagaggcggcgggaagggggccaggatgaagatgcttgtcatata
tcacaaacccaagcagatgggagtgaagtagttcaggaggtaaacagcagcgtccagatg
gttatgatggagcagttagaccctaccctacttcaaatgaagactgaagtaatggagggt
acagtacctcaggaagctgacgctactgtagatgacacccagataataacacttcaagtt
gttaatatggaagaacaacctataaaccttggggagcttcaacttgttcaggtacctgtg
ccagtaacagtacctgtggccaccacttctgtggaagaacttcagggggcttatgaaaat
gaagtagctaaagaaggcctgcctgaaggcgaacccatgatttgccacaccttacctttg
cctgaaggtttccaggtggtaaaagtaggtgcaaatggtgaggttgagacattagagcaa
ggggagcttcagccccaggaagatcccaattggcagaaagatccagactatcagcctcct
gccaaaaagacaaaaaaaaccaaaaagagcaaacttcgttacacagaggagggcaaagat
gtggatgtttctgtgtatgactttgaagaagagcaacaagagggtttattatcggaagtc
aatgcagagaaggttgttggtaacatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaaaaagacattccagtgcgagctgtgcagttatacgtgtccacgacggtcaaat
ttggatcgacatatgaaaagtcatactgatgaaagaccacataagtgccatctctgtggc
agagctttccgcacagtcaccttactgaggaaccacctaaatactcacacaggtactcgt
cctcataagtgcccagactgcgacatggcctttgtaaccagtggagaattagtgcggcat
cgccgctataaacacacccatgagaaacccttcaagtgttccatgtgtgactatgctagt
gttgaggtcagcaagttgaaacgtcacattcgctctcacactggagagcggccattccag
tgcagcttgtgcagttatgccagcagggacacttacaagctgaaaagacacatgagaacc
cattctggtgaaaagccgtatgaatgttatatctgtcatgctcggtttacccagagtggc
accatgaaaatgcacatcttacagaagcacacagagaatgtggccaaatttcactgtcca
cattgtgatactgtcatagccagaaaaagcgatttgggtgtccatttgcgaaagcagcat
tcctacatcgagcaaggcaagaaatgtcgttattgtgatgctgtgtttcacgagcggtat
gccctcattcagcatcaaaaatcccacaaaaatgagaagcgtttcaagtgtgaccagtgt
gactatgcgtgcagacaggagcggcacatgataatgcacaaacgaacccatactggagag
aaaccctatgcctgtagtcattgcgacaagaccttccgccagaaacagcttctggatatg
catttcaaacgctatcatgaccccaactttgtccctgctgcttttgtctgttctaagtgt
ggtaaaacatttacacgccggaacacaatggcaaggcatgctgataattgtactgggcta
gatggcatagatggagaaaatggaggtgaaaccaagaaaggcaaacggggaaggaaaagg
aagatgcgctctaagaaagaggagtcatcagacagtgaagaaaatgctgaaccagacctg
gatgacaatgaggatgaggaagaaactgctgttgaaattgaagctgaaccagaagtacag
cctgtgactccagccccaccaccagccaaaaagcgaagagggaggccgccgggcaagtcc
agccagcccaagcaaacccagcctacagcaatcattcaggttgaagaccagaacactggt
gcaattgaaaacattatagtggaagtcaaaaaagagcctgatgcagaaacagtagaaggt
gaagaagaagagccccaatctgctgtggtggaagctcccaatggagatctcactccagag
atgattcttagcatgatggaccggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (53)   

Download RDF
DBGET integrated database retrieval system