KEGG   Methylorubrum extorquens AM1: Mex_2p0817
Entry
Mex_2p0817        CDS       T00921                                 
Name
(GenBank) Superfamily I DNA and RNA helicase, helicase subunits-like protein (C-terminal part)
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
mea  Methylorubrum extorquens AM1
Pathway
mea03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mex_2p0817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mea03032]
    Mex_2p0817
Enzymes [BR:mea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Mex_2p0817
DNA replication proteins [BR:mea03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mex_2p0817
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mex_2p0817
SSDB
Motif
Pfam: AAA_12 AAA_19 AAA_11 AAA_30 AAA_25 AAA_22 PhoH Helicase_RecD DEAD AAA
Other DBs
NCBI-ProteinID: ACS43655
UniProt: C5B5C3
Position
megaplasmid:771049..774396
AA seq 1115 aa
MTAGACGKLARRGIRDLAAFAALPPDDPAYEEHQALKAGRAILRHRAEALAQGRTIGVPD
RAGTSAVLPKWADARVAFSVDYDVASGLTFAFGYKLLILSGGVAAETREAVEIVGSKSVA
EERRVFAALMARLQTDLLDAERIILEGRERALGRAAKEKAKRQPPTVQFYIWDRNSFEHL
SRLMGRHLEAVREPDAEGVTASPMSWIFPAAQLLKDARNISRNSPVTIVAEAVRLMAVDI
PHHYSILEVAARYQMVGIVKLAKATRRFPVSNLFKDPLSDQVPSERGLEVWSGSRLVETM
GRDAHAAKLRQTVAIKLDAMLSIVRRLTDDLDETLSSQAPTIRSIMHDQARLDGVSDDGQ
ILRHHARLMKAAEALDVDLAMAMPPQEREARYRSMRLLRRLSAEEAAEFLVGAGVAPAPR
IHVFEFRASSLEAKIKVGDFNLSLMPEDSLRLQHATLRMLKRDHPELSKRIKDDFVRDSR
RIRENCPVTVLALDRIARLVAVEDDEGLPTLFHELGIWSLDFDGAAGPGGILDPISRDFF
VAPRLEPALRSYGVPPLSVSRPLFARGVSNVALRRSARSGGSVPAERFVWDADRLAEEPS
GRSGAEALAVLERIGRSLTPRQADAVSRAVGRRLSLLWGPPGTGKSRTAVSLLIALLAVS
RGRKLRIAVTGPTWVAIENVAAELPEAFAKAGIGPVRHVRLASSRASAAGVHENLRDHIL
APSGAKDDKATKDLLGVLQARSEHVVLSGTAEQLARLVKIASEDKEAPRAPLVDFMLVDE
ASQMDVAHAVVAFTALAEDACLTVVGDDLQMPPIHPVEPPEGGAHLVGSVYDFYRLYRSG
HPGGGIGPTMLDVNYRSNAEIVDFFRNAGYGRDLRAAHPGLRIDLRPPATAESAPSRALE
AILDPGEPLVAIVHEDVFSSQRNEAEADLVSAMVAALYGRLGSLERTGEILDEAAFFREG
VGVVTPHRAQQAAILERLGARLPPEVDRESMTAAVDTVERFQGQQKAVMVASFGIGDADQ
IAAEEEFLFSLNRFNVIASRARAKLVVVMSRSLADHLPRDLAVLRGSRLLKGFVGRHLPS
VAYARIPGLGRCEIRRAGPKPHPEFVHPAPAVAAE
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgacggccggtgcctgcgggaagctcgcccgacgcggcatccgcgacctcgcggccttc
gcggcgcttccccccgacgatccggcctacgaggagcatcaggcgctcaaggcgggccgc
gccatcctgcgccatcgcgccgaggccttggctcaggggcgcacgatcggcgtccccgac
agggccgggacgtccgcggtgctcccgaaatgggccgacgcgcgcgttgcgttctcggtg
gactacgacgtcgccagcggcctcaccttcgccttcggctacaagctgctgatcctgtcg
ggcggcgttgcggccgagacgcgggaggccgtcgagatcgtcggatcgaagagcgtggcg
gaggagcgccgggtcttcgcggcgctcatggcccgtctgcagaccgatctgctcgacgcc
gagcgcatcatcctggaggggcgcgagcgcgcgctcggccgcgcggccaaggagaaggcc
aagcgccagccgccgacggtccagttctatatctgggaccgcaactccttcgagcacctg
tcccggctcatggggcgccatctggaggccgtgcgggagccggatgcggagggcgtcacg
gcttcgccgatgtcgtggatcttccccgccgcgcagctgctcaaggacgcccgcaacatc
agccggaactcgcccgtgaccatcgtcgcggaggccgtccggctgatggccgtcgacatc
ccccaccactactcgatcctggaggtggcggcgcgctaccagatggtcggcatcgtgaag
ctcgcgaaggcgacgaggcggtttccggtcagcaacctcttcaaggacccgctgtcggac
caagtaccctcggagcgcggtctggaggtctggtcgggtagccggctcgtcgagactatg
ggccgggacgcccacgcggcgaagctgcgccagaccgtggcgatcaagctcgacgcgatg
ctgtcgatcgtgcgccgtttgacggacgacctcgacgagaccctctcgtcgcaggccccg
acgatccgcagcatcatgcacgaccaagcccgcctggacggggtgtccgacgacgggcag
atcctgcgccaccacgcgcgcctgatgaaggccgcggaggccctcgacgtcgacctcgcc
atggcgatgccgccccaggagcgggaggcgcgctaccgaagcatgcggctgctgcgcagg
ctgtccgccgaggaggccgcggagttcctcgtcggcgccggggtcgcgcccgccccccgc
atccacgtcttcgagttccgcgcctcctcgctcgaggccaagatcaaggtcggcgacttc
aacctctcgctgatgccggaggacagcctccggctgcagcacgccacgctccggatgctg
aagcgcgaccaccccgagctgtcgaagcgcatcaaggacgacttcgtgagggacagccgg
cggatccgggagaactgcccggtcacggtgctggccctcgaccgcatcgcgcggctcgtc
gcggtcgaggacgacgagggtctgccgacgctgttccacgagctcgggatctggagcctc
gacttcgacggcgctgccgggccgggcggcatcctcgacccgatctcgcgcgacttcttc
gtcgccccccggctcgagccggcgcttcggagctacggcgtgccgcccctgtcggtctcg
cgccccctcttcgctcgcggcgtgtcgaacgtggccctgcgacgctcggcccggagcggc
ggctccgtgcccgccgagcgtttcgtctgggacgccgaccggctggcggaggagccgagc
ggccggtcgggcgccgaggccctggcggtcctggagcggatcggccgcagcctgacgccc
cggcaggcggacgccgtgtcgcgcgccgtcggccgacgtctcagcctcctctgggggccg
cccggcaccggcaagagccgtacggccgtgtcgctcctgatcgcccttctggcggtctcg
cgcggaaggaagctgcgcatcgccgtcaccggtccgacctgggtcgcgatcgagaacgtg
gccgccgaactgccggaggccttcgcgaaggccggaatcgggccggtccgccacgtgcgg
ctcgcctcgtcgcgggcgagcgcggcaggcgtccacgagaacctgcgcgaccatattctg
gcgccgagcggcgcgaaggacgacaaggcgaccaaggacttgctcggcgtgcttcaagca
cggtccgagcacgtggtgctgtccgggacagccgagcagctcgctcgcttggtcaagatc
gcgagcgaagacaaggaggcgccccgcgcgccgctcgtcgacttcatgctggtcgacgag
gcttcgcagatggacgtcgcgcacgccgtcgtggccttcacggcgctcgcggaggacgcc
tgcctgaccgtggtcggcgacgatctccagatgccgccgatccatccggtggagccgccc
gagggcggggcccacctcgtcggatcggtctacgacttctaccggctctaccgctccggc
catcccggcggcggcatcgggccgacgatgctcgacgtgaactaccgctcgaacgcggag
atcgtcgacttcttccggaacgccggctacggccgggatctccgggctgcccatcccggg
ctgcggatcgatctccgtcctcccgcgacggcggagagtgcgccgtcgcgggccctcgaa
gcgatcctcgatcccggcgagcccctggtggcaatcgtccacgaggacgtgttttcgagc
cagcggaacgaggccgaggccgatctcgtctccgcgatggtcgcggccctctacggccgg
ctcggctccctcgagcggaccggcgagatcctcgacgaggccgccttcttccgcgagggg
gtgggcgtcgtcactccgcaccgggctcagcaggcggccatcctggagcgcctgggcgcg
cgcctgcctcccgaggtcgaccgcgagtcgatgacggcggccgtcgacacggtcgagcgg
ttccagggccagcagaaggctgtcatggtggcgagcttcgggatcggcgacgcggaccag
atcgccgccgaggaggagttcctgttcagcctgaaccgcttcaacgtgatcgcttcccgg
gcgcgggccaaactcgtcgtcgttatgagccgcagcctcgccgaccacctcccccgggat
ctcgccgtcctgcgcggatcccgcctgctgaaaggcttcgtcggccgccacctgccctcg
gtcgcctatgcgcgcatcccggggctcggccgctgcgagatccgcagagcaggtccgaaa
ccgcaccccgaattcgtccatccggcgccggcggtcgcggcggaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (34)   

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