KEGG   Manihot esculenta (cassava): 110626822
Entry
110626822         CDS       T05761                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2 isoform X1
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03060  Protein export
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    110626822
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mesc02044]
    110626822
Enzymes [BR:mesc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     110626822
Secretion system [BR:mesc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   110626822
  Eukaryotic Sec-SRP protein
   110626822
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 ResIII CLP1_P AAA_33 MMR_HSR1 SRPRB AAA_17 Fe-ADH AAA_22 AAA_19 AAA_16 Zeta_toxin MeaB ATP_bind_1 UvrD-helicase APS_kinase DO-GTPase2 CbiA AAA_24
Other DBs
NCBI-GeneID: 110626822
NCBI-ProteinID: XP_021628629
Position
11:7047484..7051250
AA seq 495 aa
MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
NLDDLAAGHNKRRIIQQAIFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVERFK
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDL
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL
MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRIMRIARGSGRQVREVMEMLE
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM
GSTKDMMGMFGGGDK
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggtgttggcacagctaggagggagcatatcccgagcaatccagcagatgagcaatgcc
acaatcatcgatgagaaggttttaaatgagtgcctcaacgagatcacccgtgcgcttctt
caatccgatgtccaattcaagcttgtccgcgacatgcagactaatatcaagaaaattgtc
aatcttgatgatctcgctgctggtcataacaaacggaggatcatccagcaggcaatattt
aacgagctatgcaaaattttggatccggggaagccatcttttactccgaagaaagggaaa
acaagtgttgttatgtttgttggtttacaagggtctgggaaaactactacatgtactaaa
tatgcatattatcatcagaaaaaaggttggaaacctgctctagtatgtgctgatacattc
agagctggtgcttttgatcagctaaaacagaatgccaccaaagctaagattccattttat
ggaagttatacggaatcagatcctgtgaagattgcagtagaaggggtggagagattcaaa
aaggaaaattgtgatcttataattgttgataccagtgggcgccataaacaggaagctgct
ctttttgaagaaatgcgccaagtctctgaagcaacgaaaccggatcttgttatttttgtt
atggatagcagtattggtcaagctgcatttgatcaagctcaagcatttaagcaaagtgtt
gcagttggagctgtgattgttaccaaaatggatggtcatgcaaagggaggtggtgctctt
agtgctgttgcagcaacaaagagccctgttatatttattggaacaggagagcatatggat
gagtttgaagtttttgatgttaaaccttttgttagtcgccttttaggaatgggtgattta
tctggattcatggacaaaattcatgaggttgttcctatggatcaacagcctgagcttctg
caaaaactctcagaagggaactttaccttgaggattatgtatgagcagtttcagaacatt
ctgaaaatgggtcccattggccaggtattttcaatgcttccaggatttagtgctgaatta
atgccaaaaggtcgtgagaaagaaagccaggcgaagattaagcgttatatgactatgatg
gattcgatgacaaatgaagagttagatagttctaatccaaagctgatgaatgagtcccgt
attatgaggatagcacgaggttctggccgccaagttagagaagtaatggaaatgttggaa
gagtacaagcgtctagccaaaatctggagcaaaatgaagggacttaagattcctaagaag
ggtgaaatgagtgctttatccagaaatatgaatgcacaacacatgagcaaagtcctcccg
ccacagatgctgaagcaaattggtggaatgggtggcttgcaaaatttaatgaagcaaatg
ggttctaccaaagatatgatggggatgttcggaggtggggacaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (23)   
   Pfam (23)   
All databases (36)   

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